Gene VIBHAR_02580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02580 
Symbol 
ID5555509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2598829 
End bp2599866 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID640908065 
Producthypothetical protein 
Protein accessionYP_001445768 
Protein GI156974861 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAG AAATTATTGC AATGGCCAAA GAGGCAGGAC ATATGTTTCT GTTCTTGGCT 
ACTGAACTAG TCATCCTATT TTTAGCTGTA AGTTACTTAG TAGGTATTCT TCAAGAGTTT
TTAACCCCAG AGAAAATCCA ATCCATCCTG AGCTCTAGAA AGGGTAAAGG CTACATTGTG
GCAGCGTTCC TTGGTGCTAT CACACCATTT TGCTCTTGCT CAACTATTCC TTTTTTGAAA
GGCCTGTTGA GAGCTAGAGC GGGTTTCGGT CCAATGATGG TGTTCTTGTT TGCATCACCA
CTGCTTAATC CAGTCATCAT TGGTTTGTTC ATTGCAACAT TCGGCTTGAA CGTCGCTGTG
TTCTACTTTG CAGTAGCAAT GGTAGTTGCC GTTTCAGCTG GTTTTATCTT AGAGAAGTTA
GGCTTTGAAA AATATGTGCG TCCAGAAGCG TATGAGTCAA CAGATTCAGG CTCAAGTTGT
GGTACTTCTT GTAGTGACTC CAAACCAGCA CCTAAAAAAG AATCTAGCTG TGGTACATCT
TGTGGTGACT CTGTACCACA AGTACAAGTT TCTTGCTGCT CATCGATCGG TGAAGCTGCG
GCTACAATTG TTCCATCCGC AGAGCCAAGC CGTTGGGTTC GTATTTGGAT AAATACGTGG
AAAGATTTCA AACAAGTTCT TCCATACTTG CTAATGGGTA TTGCTCTCGG TTCATTGATC
TATGGCTTTA TCCCAACAGA TTTAATCGCT GAGTATGCAG GTGCTGGTAA CTGGTATGCA
ATCCCTGTAG CGGCTGTTAT CGGTATCCCA CTATACATTC GAGCAGAGGC CGTTATCCCA
CTAAGTGCTG CTCTAGTTCA GAAGGGGATG GCACTTGGTT CTGTAATGGC ATTGATCATC
GGCAGTGCGG GCGCAAGTCT AACCGAGGTA ATCTTGTTGA AATCAATCTT CAAGAACCAA
ATGATTGCAG CGTTCCTGTT CGTCATCCTA AGTATGGCAG TGGGTGCAGG TTACTTATAC
ACATTCTTGT TTGCTTAA
 
Protein sequence
MNPEIIAMAK EAGHMFLFLA TELVILFLAV SYLVGILQEF LTPEKIQSIL SSRKGKGYIV 
AAFLGAITPF CSCSTIPFLK GLLRARAGFG PMMVFLFASP LLNPVIIGLF IATFGLNVAV
FYFAVAMVVA VSAGFILEKL GFEKYVRPEA YESTDSGSSC GTSCSDSKPA PKKESSCGTS
CGDSVPQVQV SCCSSIGEAA ATIVPSAEPS RWVRIWINTW KDFKQVLPYL LMGIALGSLI
YGFIPTDLIA EYAGAGNWYA IPVAAVIGIP LYIRAEAVIP LSAALVQKGM ALGSVMALII
GSAGASLTEV ILLKSIFKNQ MIAAFLFVIL SMAVGAGYLY TFLFA