| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02525 |
|---|
| Symbol | |
|---|
| ID | 5553977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2550427 |
|---|
| End bp | 2552205 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908011 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445714 |
|---|
| Protein GI | 156974807 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT CGACAACGTT TAAACGGTTA ATGTCTTACC CATTGTCGCA GCCAAAACCC
ATGCTAAAAG GCTTGGCACT ACTGTTTATC GCGGCGTTAG CCAGCGCTGG TGGGCCATGG
CTTGTTCAAT ACTTTATTGA CGAACACATC GCTAAAGGGG ATTACTCGCG CGACATTTTA
ATATCACTCG CAGCAGGCTA CATTGCCTTA CAACTTATCT CGGCGGTGTT TCAATACTTC
CAATCATTGC AATTCAGTAT TGTGGCAACC AACACGATCA AAACGATTCG CAAGCAGGTT
TTCTCTGGTG TGATAAAGCA GCCTTTATCG GCATTTGACT ACACTCCTGC GGGTAAGTTG
GTGTCTCGAA TCACCAACGA TACAGAATCG CTGCAACAGT TTTATGAGTT ACTTATCGCC
ACCGTGGTGA AAAACGCAGT GATGATCTTG GTGATGTTGG GCGTGATGTT TTACATGAGT
TGGAAGTTGA CCATCGTCGT GTTGGTACTG CTACCAATCG TGATCGGCTT TATGTACTTG
TTCAAAAAGC TCAGCACAGA AAGCTATCGA AACATGCGTG ATCTGCTGAC CGACATTAAC
GCCAATTTGA GTGAATCCAT TCAAGGAATG AGTGTGGTGC AGTTAATGCT GCAAGAAGAA
CGTTTCAACA AACAGTTTAA CGGCCTAACC GACGACCATC TGGTTGCCTC TAAAAAAGTG
ATTCGCTTGA ATGGCTACCT CTTACGCCCC CTGATGGATT TACTTGCAGG CCTTGCCCTA
CTCTCTCTTG TGGCTATTTT TGGCTTTAAT GGTGTCGAAC TGATTGGTGT GGGTGTCCTG
TACGCTTTCA TCAGTTACCT AGCGCGCGTA ACCGAGCCTT TGATCGAGAT GACACAGCAG
TTGGCATTGC TTCAGCAAGC ATTGGTATCG AGTGAGCGTG TATTCGAGTT GATCGATGCG
AAAGAGCAAA CTTACGGCGA TGACCATAAG CCACTGCAAA CTGGCGCGAT TGAGCTTAAC
AACCTAACTT TCAGCTACGA TGGCAAACAA GACGTCTTGA AAGACATTTC GCTGAAAGCA
TCGCATCAAG ACTTTATTGC GCTTGTTGGC CACACCGGTA GCGGTAAGAG CACTCTCGCT
TCTTTGCTCA TGGGGTTCTA CCCAACCGAA ATCGGTGAAC TGCTGATTGA TGGGCGTCCG
TTGAAGTCTT TAGGCAAAGA CGTACTGCGC AAAGACGTTG CCATGGTGCA GCAAGACCCA
CATATTCTCC CTGCCAGTGT GCGTGAAAAC GTCTCTTTGG GAAGAACGAT AGAAGATGTG
CAGATTTGGG ATGCACTTGA AAAAGTGGGA TTAGCTGAAC AGATTCGTCG ATATCCAAAT
GGATTGGATA CTCAGCTTGG CCAAGGTGAA ACAAATCTCT CGGCAGGTCA AAAACAATTG
CTTGCACTCG CTCGTGTACT TGTCGCTAAG CCTAAAATTT TGATTTTGGA TGAGGCGACG
GCAAACATTG ACTCAGGTAC AGAAGCGTTG ATACAAAAAA GCCTTAAGGT GCTTCGTCAA
GATATGACGC TTGTAGTAAT CGCTCACCGC CTATCGACGA TTTTGGATGC CGACCAAATC
ATCGTTCTTC ACCATGGAGA TTTAGTAGAG AGCGGCACGC ACAAAGCGTT ATTAAAACAA
AATGGTCGTT ACGCGCAAAT ATACCAACTT CAGCAAGCCA ATCGCCATAT TCAGCAAATC
GAAGAGGAAG ACGACAAGCA ATTCGAGGAA GCTGTTTAA
|
|---|
| Protein sequence | MKQSTTFKRL MSYPLSQPKP MLKGLALLFI AALASAGGPW LVQYFIDEHI AKGDYSRDIL
ISLAAGYIAL QLISAVFQYF QSLQFSIVAT NTIKTIRKQV FSGVIKQPLS AFDYTPAGKL
VSRITNDTES LQQFYELLIA TVVKNAVMIL VMLGVMFYMS WKLTIVVLVL LPIVIGFMYL
FKKLSTESYR NMRDLLTDIN ANLSESIQGM SVVQLMLQEE RFNKQFNGLT DDHLVASKKV
IRLNGYLLRP LMDLLAGLAL LSLVAIFGFN GVELIGVGVL YAFISYLARV TEPLIEMTQQ
LALLQQALVS SERVFELIDA KEQTYGDDHK PLQTGAIELN NLTFSYDGKQ DVLKDISLKA
SHQDFIALVG HTGSGKSTLA SLLMGFYPTE IGELLIDGRP LKSLGKDVLR KDVAMVQQDP
HILPASVREN VSLGRTIEDV QIWDALEKVG LAEQIRRYPN GLDTQLGQGE TNLSAGQKQL
LALARVLVAK PKILILDEAT ANIDSGTEAL IQKSLKVLRQ DMTLVVIAHR LSTILDADQI
IVLHHGDLVE SGTHKALLKQ NGRYAQIYQL QQANRHIQQI EEEDDKQFEE AV
|
|---|
| |