Gene VIBHAR_02483 details

Gene Information

• Locus tag: VIBHAR_02483
• ID: 5556467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2500670
• End bp: 2501299
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640907969
• Product: hypothetical protein
• Protein accession: YP_001445672
• Protein GI: 156974765
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTCG ACACCTTGCT GGCTTTTGTC GGAATCGTCT TCTTTTTGGC CATTATTCCC 
GGCCCTAACG CATTGCTCAT TTTATTTACC GCACTTACGC AGAGTCGTCG CTTTGCTATT 
GCCAATATTT TCGGTGTGGC ACTTGGCTTT CTGATCCACG CTTTTGTCTC CGCAAAAGGG 
TTGAGCTTGT TGCTTTCACA ATCAGCGCTG GCGTTCAACA TATTAAAGTG GATGGGTGTT 
GCATACTTAA TTTGGTTGGG CATCAATAAC CTAAGAAGTG GGCTTAAACT GGCAGATCAA 
AAGTTAAAAC TCGACCGTAA AATCGAGGAA CAGACTCTCA AGCAAGCCTT TGTGAAGGGA 
CTATTGACTA ACCTGCTTAA TCCAAAAATC GTGTTGTTCT ACCTCTCTAT CTTCCCTCAG 
TTTGTGCAAC CTGAACATAT TCTCGAGCAA AGCATCATGT TGGGTGCTCT TCAGGCAAGC 
ATCGTTGCTA GTTGGTTTTT GTTTGTGATT TTCTTTGCCA CTAAGGTTAA GGCCATGCTC 
ACTTCTTCGA AAACAAGCAA GTGGCTGAAC TACGTAAGTG GGGGGTTGTT TATTTTCTTC 
GGCATCGGTT TAGCTAATAC CCGTTTTTAA 

 

Protein sequence

MNFDTLLAFV GIVFFLAIIP GPNALLILFT ALTQSRRFAI ANIFGVALGF LIHAFVSAKG 
LSLLLSQSAL AFNILKWMGV AYLIWLGINN LRSGLKLADQ KLKLDRKIEE QTLKQAFVKG 
LLTNLLNPKI VLFYLSIFPQ FVQPEHILEQ SIMLGALQAS IVASWFLFVI FFATKVKAML 
TSSKTSKWLN YVSGGLFIFF GIGLANTRF