Gene VIBHAR_02476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02476 
Symbol 
ID5556329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2493716 
End bp2494351 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID640907962 
Producthypothetical protein 
Protein accessionYP_001445665 
Protein GI156974758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTT TGAATTTTGA GGCATTTTTG ATTGCCATTA CGATTTTGAC GCTGACGCCG 
GGATTGGACA CCGCATTGGT AATTCGTAAT ACAAGCCGTT CAGGCCTTAA GGACGGCTGT
ACAACTAGTC TGGGAATTTG CTTTGGTCTA TTCGTTCATG CACTGTTTTC AGCGATCGGG
ATTTCTGCCG TTCTGGCGCA ATCTGCTGAG TTGTTTCAGA TGGTCAAAAT GGTAGGCGCA
GCTTACTTGA TTTGGCTGGG GCTAAGCAGC TTGCGCGCAT TGATGAAGTC AAGCAGTGGT
ATTGCTGTCT CTGAGCAAGC GCATCAAGCA TACAGTGGTA AACGTGCATT CCGTGAAGGC
TTCCTTTCTA ACGTTTTAAA TCCGAAAACG GCGGTATTTT ATCTCGCATT TTTGCCCCAG
TTTGTAAATC CTGAAGGCTC TCCACTGCTG CAATCTATGC TGATGGCATC GATTCATTTC
ATCATTGCGA TGGTGTGGCA ATGTGGCTTA GCTGGCGCAT TGAACTCAGC AAAAACACTG
CTGAAAAACG CAAGTTTCAT GAAGTGGATG GAGGGGGCTA CGGGGGCTGT ACTCGTGGCG
CTTGGTATTA AACTACTTGT AGAAAAACCA GCCTAA
 
Protein sequence
MDILNFEAFL IAITILTLTP GLDTALVIRN TSRSGLKDGC TTSLGICFGL FVHALFSAIG 
ISAVLAQSAE LFQMVKMVGA AYLIWLGLSS LRALMKSSSG IAVSEQAHQA YSGKRAFREG
FLSNVLNPKT AVFYLAFLPQ FVNPEGSPLL QSMLMASIHF IIAMVWQCGL AGALNSAKTL
LKNASFMKWM EGATGAVLVA LGIKLLVEKP A