| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02455 |
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| Symbol | |
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| ID | 5556204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2468921 |
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| End bp | 2470669 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640907941 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001445644 |
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| Protein GI | 156974737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACAAG AAAGTCATCA CTCGGCTTCC TACATCAAAC TTAATTTGAA CTTAAATATA
GTCACGTTTT TGAGGAGACA AATCGTGAGC ACCGACAACA ATGGCGGTAT ACAACGCCCC
GACGGTAAGG TGAACCCGAT CGATACTGAT TACCAGATTG GTCAGGACAA CGTCGCGTTA
AAAGTAGGTC CTTTTGGACT TGATATTCAC AACCGTGTGT TTGCTATTTC AGGTATGTCG
ATCATCCTGT TCGTAGTGTT AACACTGACA TTCAGACAAC AAGTAGAACC GTTTTTTGCG
GGTTTGCGTG GTTGGCTAGT GTCGAATCTT GATTGGTTCT TCCTATCTGC AGGCAACGTG
TTTGTCGTGG TGTGTTTGAT CCTGATCGTA ACGCCACTTG GTCGCGTTCG TATCGGCGGT
ACAGAAGCAA CACCGGACTA CACTTACGCA GGCTGGTTAG CGATGCTATT CGCTGCTGGT
ATGGGTATCG GTCTGGTATT CTTCGGCGTA TCTGAACCTA TGTCTCACTT CAGTGCTGCT
CTTGGCGGTG TGAACGTTGA GAATGGTGTT CGTACTGACT GGGCTCCACT AGGCGCAGCA
GAGGGTGATA CATCAGCGGC ATCTGCACTG GGTATGGCAG CAACGATTTA CCACTGGGCA
CTTCACCCAT GGTCAATCTA CGCACTATTG GCACTTGGCT TGGCGATCTT CTCGTTCAAC
AAGGGCTTAC CTCTAACGAT GCGTTCTATT TTCTATCCTC TTTTTGGCGA GCGAGTTTGG
GGTTGGGTTG GTCACATTAT TGATATCTTA GCGGTAGTTG CGACGGTATT TGGTCTTGCG
ACTTCTCTTG GTTACGGCGC ATCACAAGCA GCTACAGGTC TAAACTTCCT GTTCGGTATT
CCGATGACAG AGACAACGCA AGTTGTGCTT ATCGTAATCA TCACAGCACT TGCTTTGATC
TCAGTAGTCG CTGGTTTGGA TAGTGGTGTA AAACGTCTGT CTGAAATCAA CATGGGCTTA
GCGGCACTAT TGCTTTTGTT CGTGATCATC GTGGGCCCGA CAGTCGCTAT CATGACTGGT
TTCTTCGAGA ACATCATGTC CTATCTTGCG AATGTTCCTG CGCTTTCAAT GCCATTTGGT
CGTGAAGACG TGAACTACTC TCAAGGTTGG ACTGCGTTCT ACTGGGCTTG GTGGATTTCA
TGGTCACCAT TCGTAGGTAT GTTTATCGCG CGTGTATCTC GTGGCCGTTC AGTTCGTGAG
TTCATCGTGT GTGTAATCCT GATCCCATCA ACCGTGTGTG TATTATGGAT GACGGCATTC
GGTGGTACGG CGATCAGCCA ATACGTGAAC GATGGTTACC AAGCGGTATT TGATGCAGAG
CTTCCACTTA AACTGTTCGC GATGCTAGAT GTGATGCCAC TGTCTCAAAT CACCTCTATC
GTAGGTATTA TTCTGGTTGT GGTGTTCTTC ATCACTTCTG CGGACTCTGG CTCGCTTGTG
ATCGATACGA TTGCAGCTGG CGGTAAAGTA GATGCACCAA CACCTCAACG TGTATTCTGG
TGTACATTTG AAGGCTTAGT TGCAATCGCG CTAATGCTTG GCGGTGGTCT CGCGGCTGCA
CAAGCGATGG CGGTAACAAC TGGTCTGCCA TTCACTATCG TATTGTTGGT TGCAACGGTA
TCTCTAGTGA AAGGTTTGAT GGATGAGCCT CGCCCAACAT CAAAATCAAT GAAGAAAGCG
AAAGCGTAA
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| Protein sequence | MTQESHHSAS YIKLNLNLNI VTFLRRQIVS TDNNGGIQRP DGKVNPIDTD YQIGQDNVAL
KVGPFGLDIH NRVFAISGMS IILFVVLTLT FRQQVEPFFA GLRGWLVSNL DWFFLSAGNV
FVVVCLILIV TPLGRVRIGG TEATPDYTYA GWLAMLFAAG MGIGLVFFGV SEPMSHFSAA
LGGVNVENGV RTDWAPLGAA EGDTSAASAL GMAATIYHWA LHPWSIYALL ALGLAIFSFN
KGLPLTMRSI FYPLFGERVW GWVGHIIDIL AVVATVFGLA TSLGYGASQA ATGLNFLFGI
PMTETTQVVL IVIITALALI SVVAGLDSGV KRLSEINMGL AALLLLFVII VGPTVAIMTG
FFENIMSYLA NVPALSMPFG REDVNYSQGW TAFYWAWWIS WSPFVGMFIA RVSRGRSVRE
FIVCVILIPS TVCVLWMTAF GGTAISQYVN DGYQAVFDAE LPLKLFAMLD VMPLSQITSI
VGIILVVVFF ITSADSGSLV IDTIAAGGKV DAPTPQRVFW CTFEGLVAIA LMLGGGLAAA
QAMAVTTGLP FTIVLLVATV SLVKGLMDEP RPTSKSMKKA KA
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