Gene VIBHAR_02435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02435 
Symbol 
ID5553874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2449950 
End bp2450930 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content48% 
IMG OID640907921 
Producthypothetical protein 
Protein accessionYP_001445624 
Protein GI156974717 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAA AATCTCTAAA ACCCGCTCTA CTATCACTGT GTGCTTTGGG TGTCGCTTCT 
TGGGTTGGTT ATCAGTTCTA CCAAGCGTAT CAACCGGAAC CAGCACGTTT ACAAGGTTTG
ATTGAAGCAC AGCAATACAG CATATCTTCT AAAGTCCCAG GTCGTATTGA TGAAGTTATG
GTGCGCAAAG GTGATGATGT AGAAAAAGGT CAATTGATCT TTACTCTTCA CAGCCCAGAA
ATCGAAGCAA AACTGGAACA GGCAAAAGCG GGTGAAAAAG CCGCTGGCGC CTTGGCACTA
GAAGCAGAAA AAGGCGCGCG TGAGCAACAA ATCCAAGCCG CAAAGGACCA ATGGTTGAAA
GCAAAAGCCG CTGCAGATTT GATGGAAAAG ACTTACCAAC GTGTAAATAA CCTCTACAAA
GATGGCGTAG TCGCAGAGCA AAAACGCGAT GAAGCCATGA CACAATGGCA AGCTTCGAAA
TACACCGAAA GCGCAGCGTT CCAAATGTAC AACATGGCGA AAGAAGGTGC GCGTAGCGAA
ACTAAAGTCG CGGCAGCAGA AAAAGCGCGC ATGGCAGCAG GCGCAGTAGC AGAAGTAGAA
GCGTACGCAA AAGACACACA AATCTACAGC TGGTTTGATG GTGAAGTTTC TCAAGTTCTA
CTGCAAAGTG GCGAACTGGC GCCTCAAGGC TTCCCGGTTG TGACGGTTAT TGATACTCAA
GATTCTTGGG CAACACTGAA CGTACGTGAA GATTTGCTCA AGCACTTCAC CAAAGGCACC
ACATTCAAAG CTTACCTACC TGCACTGGAC AAAGATCTTG AGTTTAAAGT GACTCACGTT
GCGGTAATGG GTGATTTTGC AACTTGGCGT GCAACAGACG CATCGAAAGG TTTTGATCTT
CGTACCTTCG AAGTCGAAGC TCGCCCTACC CAACCAGAGC CTGAGCTTCG AATGGGCATG
AGCGTTGTGG TTGAGCTGTA A
 
Protein sequence
MAAKSLKPAL LSLCALGVAS WVGYQFYQAY QPEPARLQGL IEAQQYSISS KVPGRIDEVM 
VRKGDDVEKG QLIFTLHSPE IEAKLEQAKA GEKAAGALAL EAEKGAREQQ IQAAKDQWLK
AKAAADLMEK TYQRVNNLYK DGVVAEQKRD EAMTQWQASK YTESAAFQMY NMAKEGARSE
TKVAAAEKAR MAAGAVAEVE AYAKDTQIYS WFDGEVSQVL LQSGELAPQG FPVVTVIDTQ
DSWATLNVRE DLLKHFTKGT TFKAYLPALD KDLEFKVTHV AVMGDFATWR ATDASKGFDL
RTFEVEARPT QPEPELRMGM SVVVEL