| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02427 |
|---|
| Symbol | |
|---|
| ID | 5553983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2440667 |
|---|
| End bp | 2442115 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640907913 |
|---|
| Product | 6-phosphogluconate dehydrogenase |
|---|
| Protein accession | YP_001445616 |
|---|
| Protein GI | 156974709 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTG ATATCGGTGT AATCGGCCTT GCTGTAATGG GTCAAAACCT TATCCTTAAC
ATGAACGACC ACGGCTTTAA AGTTGTGGCT CACAACCGTA CTGCTGCAAA AGTAGACGAG
TTCCTGGAAG GTCCAGCGAA AGGCACAAAC ATCATCGGTG CATACTCTCT AGAAGAACTA
GTAGAGAAGC TAGAAACGCC ACGTAAAGTG ATGCTTATGG TTCGTGCAGG TGACGTTGTT
GACACGTTCA TCGACAACCT AATCCCGCTT CTAGACGAAG GCGACATCAT CATTGACGGT
GGTAACACTA ACTACCCAGA CACAAACCGT CGCGTAGCAC ACTGCCGTGA GAAAGGCATT
CACTTCATCG GTACTGGTGT ATCTGGTGGT GAAGAAGGTG CACGTTTTGG TCCTTCAATC
ATGCCTGGCG GCGCGGCTGA AGCTTGGGAA GCGGTTAAGC CAATCTTCCA AGGTATCTCT
GCAAAAACTG ACGCTGGCGA GCCATGTTGT GACTGGGTTG GTAACGACGG TGCTGGTCAC
TTCGTTAAGA TGGTGCACAA CGGCATCGAA TACGGTGACA TGCAGCTTAT CACTGAAGCT
TACCAATTCA TGAAAGACGG TCTTGGTATG TCTGCTGACG AGATGCAAGC AGTATTCGCT
GATTGGAACA AGACTGAGCT AGACAGCTAC CTTGTTGAAA TCACGGCTGA CATCCTTGGC
TACAAAGATG AAGACGGCGA GCCTCTAGTT GAGAAGATCC TAGACACAGC AGGCCAAAAA
GGTACTGGTA AGTGGACAGG TATCAACGCA CTAGACCTAG GTATTCCTCT AACGCTTATC
TCTGAGTCTG TGTTCTCTCG TTGCCTATCT GCACTGAAAG ATCAACGTGT TGAAGCGGAA
TCTCTATTCG GCAAGACAAT CACTCCAGTT GAAGGCGACA AGCAAGAGTG GGTTGATGCA
CTGCGTCAAG CGCTACTAGC TTCTAAGATC ATCTCTTACG CTCAAGGCTT CATGCTAATG
CGCGAAGCAT CGAACGAAAA CGGTTGGGAC CTAAACTACG GTAACGTAGC ACTAATGTGG
CGTGGTGGTT GTATCATCCG TTCTGCGTTC CTAGGCAACA TCCGTGATGC GTACGAAGCA
AACCCAGATA TCGCATTCCT AGGTTCTGAT GAGTACTTCA AAAACATCCT GCAAGGTAGC
CTAGCAGCAT GGCGTAAAGT AGCAGCGAAA TCTCTAGAGT CTGGCATCCC AATGCCATGT
ACGATTTCTG CGCTATCTTT CCTAGACGGT TACACAACAG CTCGTCTACC AGCAAACCTG
CTTCAAGCTC AACGTGACTA CTTCGGTGCT CACACTTACG AGCGTACGGA TCGTCCACGT
GGTGAATTTT TCCACACAAA CTGGACTGGT ACAGGTGGCG ACACAGCGTC TACAACTTAC
GACGTTTAA
|
|---|
| Protein sequence | MKGDIGVIGL AVMGQNLILN MNDHGFKVVA HNRTAAKVDE FLEGPAKGTN IIGAYSLEEL
VEKLETPRKV MLMVRAGDVV DTFIDNLIPL LDEGDIIIDG GNTNYPDTNR RVAHCREKGI
HFIGTGVSGG EEGARFGPSI MPGGAAEAWE AVKPIFQGIS AKTDAGEPCC DWVGNDGAGH
FVKMVHNGIE YGDMQLITEA YQFMKDGLGM SADEMQAVFA DWNKTELDSY LVEITADILG
YKDEDGEPLV EKILDTAGQK GTGKWTGINA LDLGIPLTLI SESVFSRCLS ALKDQRVEAE
SLFGKTITPV EGDKQEWVDA LRQALLASKI ISYAQGFMLM REASNENGWD LNYGNVALMW
RGGCIIRSAF LGNIRDAYEA NPDIAFLGSD EYFKNILQGS LAAWRKVAAK SLESGIPMPC
TISALSFLDG YTTARLPANL LQAQRDYFGA HTYERTDRPR GEFFHTNWTG TGGDTASTTY
DV
|
|---|
| |