Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02419 |
Symbol | |
ID | 5554340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2430419 |
End bp | 2431390 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640907905 |
Product | hypothetical protein |
Protein accession | YP_001445608 |
Protein GI | 156974701 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGC TCAAGCAAAT TGCTGTCGCG GCTTCTCTGG CTGCACTAAG TACAAGTTTT TCAGTTTCTG CTAAAGATAC GTTCGTGACC ATTGGTACGG GCGGTGTAAC TGGTGTGTAC TACCCAACGG GTGGTGCAAT TTGTCGTTTG GTAAATAAGT CACGTGCTGA CCATAACATT CGTTGTTCGG TAGAAAGTAC CGGTGGTTCT ATCTACAACA TCAATACTAT TCGCGCAGGT GAGCTAGACC TTGGTATCGC TCAGTCAGAC TGGCAGTACC ATGCTTACAA CGGTACGAGT AAGTTCGAAG ATAAAGGACC ATTCAAAGAG CTTCGTGCTG TGTTCTCCGT TCACCCGGAA CCGTTCACTG TTGTGGCTCG TAAAGATGCA AACATTAAAT CGTTTGATGA TTTGAAAGGT AAACGCGTTA ACATCGGTAA CCCTGGCTCT GGCCAACGCG GTACGATGGA AGTGCTAATG AAAGAGTACG GCTGGACGAA TGACGACTTC AAATTGGTGT CTGAGCTGAA AGCATCCGAG CAGTCTAAAG CGTTATGTGA TAACAAGATC GATGCGATGA TCTACACAGT AGGTCACCCA AGTGGTGCGA TTAAAGAAGC AACCACATCG TGTGACAGCA ACATCGTGAC TGTTGCAGGC AAGCAAGTAG ATAAACTTGT CGCAGACAAC AGCTTCTACC GCATTGCAAA TGTATCGGGT GGTATGTACC GCGGTTCTGA AAACGATGTA CAAACCTTTG GTGTAGGTGC GACGTTTGTT TCTTCAACGG CAGTGCCTGA TGAAGTGGTT TACAACGTAG TGAAAGCGGT ATTCGAAAAC TTTGACGACT TCCGCCGTCT ACACCCAGCA TTTGCCAACT TGAAGAAAGA AGAAATGGTG AGAGATGGTT TATCTGCGCC GCTTCACCCA GGTGCTGAGA AGTACTACAA AGAAGTGGGT TTGATTAAGT AA
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Protein sequence | MLKLKQIAVA ASLAALSTSF SVSAKDTFVT IGTGGVTGVY YPTGGAICRL VNKSRADHNI RCSVESTGGS IYNINTIRAG ELDLGIAQSD WQYHAYNGTS KFEDKGPFKE LRAVFSVHPE PFTVVARKDA NIKSFDDLKG KRVNIGNPGS GQRGTMEVLM KEYGWTNDDF KLVSELKASE QSKALCDNKI DAMIYTVGHP SGAIKEATTS CDSNIVTVAG KQVDKLVADN SFYRIANVSG GMYRGSENDV QTFGVGATFV SSTAVPDEVV YNVVKAVFEN FDDFRRLHPA FANLKKEEMV RDGLSAPLHP GAEKYYKEVG LIK
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