Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02289 |
Symbol | potA |
ID | 5555350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2287754 |
End bp | 2289034 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640907775 |
Product | putrescine/spermidine ABC transporter ATPase protein |
Protein accession | YP_001445478 |
Protein GI | 156974571 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGGA ATGTTTACTT TTGCCTGCAA AATTTTTTCT GTTTCAAGAT AAGAAAATGC TTTGATTTCA CAATTTTGGT GATTATGATG CGCGCCTCAA AAGTGAATGA CTTATGTCAC ATCAATTGGA TACAACCCAA TTTGAACGTG GGAGAAATAC AGACGTTGAA CGCTAAACAG CAAGCAGGAA AGCCAGTAGT TCGTCTATCT GGTATTAGCA AAAGTTTCGA TGGTAAGGAA ATCATCGGTA ATTTAAATCT GGATGTTAAT CATGGTGAGT TTCTGACGAT TCTTGGTCCT TCTGGTTGTG GTAAAACAAC GGTTTTACGC ATGATCGCGG GCTTTGAGAC GGCAGATAAC GGTCAAATCG TACTAGATGA CCAAGATGTA ACACAGGTTC CTGCAGAGCA AAGGCACGTC AACACGGTAT TTCAGAGTTA TGCACTCTTC CCTCATATGA CCGTATTTGA AAACGTTGCA TTTGGTCTTC GCATGCAGAA AACACCTGCT GCAGAGATCG AGCCACGAGT TATGGATGCG CTACGCATGG TTCGCCTAGA AAAAATGGCA CAGCGTAAGC CTCACCAACT TTCTGGTGGT CAGCAACAAC GTATCGCCAT TGCGCGTGCA GTTGTGAACA AACCAAAAGT ACTGCTGCTA GATGAATCTC TATCTGCACT TGATTACAAA CTACGTAAGC AAATGCAAAT CGAGCTTAAA CAGCTTCAGC GTCAACTTGG TATTACCTTT ATCTTCGTTA CGCACGATCA GGAAGAAGCC CTATCGATGT CTGACCGCAT TATTGTTATG CGCGACGGTG TTATTGAACA AGACGGCTCT CCGCGTGAGA TCTACGAAGA ACCTAAGAAC CTATTTGTTG CTCGCTTTAT CGGTGAGATC AACGTATTTA ACGCTACCAT GCTAGAGCGT ATCGACGAGA AACGTATCCG TGCAGAAATT GAAGGCGTTG AATCCGTTGT TTACTACGAT CAAGAAGCAC AATCCGGTGA CAAACTACAA GTACTACTTC GCCCAGAAGA CTTACGCATC GAAGAGATCA AAGAGTCTGA AGAAAAAGGC ATCGTAGGTC ACGTAACAGA GCGTACCTAT AAAGGTATGA CGCTTGATTC AGTTATCCAG TTGGAGTCAG GCATGCGCGT GATGGTGAGC GAATTCTTTA ACGAAGATGA TCCAGATGTG GACCACTCCC TCGGCCAGAA AGTCGCTATT ACTTGGGTTG AGAGCTGGGA GGTAGTACTA AATGATAAGC AAGAAGCTTA A
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Protein sequence | MVRNVYFCLQ NFFCFKIRKC FDFTILVIMM RASKVNDLCH INWIQPNLNV GEIQTLNAKQ QAGKPVVRLS GISKSFDGKE IIGNLNLDVN HGEFLTILGP SGCGKTTVLR MIAGFETADN GQIVLDDQDV TQVPAEQRHV NTVFQSYALF PHMTVFENVA FGLRMQKTPA AEIEPRVMDA LRMVRLEKMA QRKPHQLSGG QQQRIAIARA VVNKPKVLLL DESLSALDYK LRKQMQIELK QLQRQLGITF IFVTHDQEEA LSMSDRIIVM RDGVIEQDGS PREIYEEPKN LFVARFIGEI NVFNATMLER IDEKRIRAEI EGVESVVYYD QEAQSGDKLQ VLLRPEDLRI EEIKESEEKG IVGHVTERTY KGMTLDSVIQ LESGMRVMVS EFFNEDDPDV DHSLGQKVAI TWVESWEVVL NDKQEA
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