Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02139 |
Symbol | |
ID | 5554768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2142728 |
End bp | 2143597 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640907626 |
Product | transcriptional regulator |
Protein accession | YP_001445331 |
Protein GI | 156974424 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCGA AACAACTCAA ACACTTTTTG GCGGTCGCGG AACACGGCAA CATTACTCAT GCAGCTAAGG CTTTGCACAT TGCTCAGCCA GCGTTAAGCA TTTCAATTAG GAAGTTCGAA CAGTCTCTTG GTGTGACGTT GTTTCGCCGA GAAGAGAAGA AAATCAGCTT AACCAAAGAA GGGGAAACAC TGTTGGTTCA CGCTAAACGA GTGATTCAGC AGTTACACGA TGCGCAGCTA GCGATTGATG AACTCAAAGG TTTAGCCAAA GGGGAAGTGC GCCTTGGTAC GCCTTCAATG ATGGGCAGCT ATTTTTTCCC TCGAATTGTC ATGGCGTTTA AGAGCCAGTA TCCAGATTTA AAGCTGACGC TGGTGGAGGC GGGTACTCAG TCTATCCGCC GAATGTTACT TAATGGACAG CTCGATATTG GCGTGATCAG CTGTGACGAT GTACCAGACG ACTTAGAAAC GGATCATCTG TTTACTAGCC AAATGGTTGC CGTCGTGGCT CCGGAACATG ACTTAGCTCA GCGCAGTACC ATCACATTTG ATCAGTTTTT CGAACATGAT TTGGTGATGT TCCAACATGG CTACTTCCAC CGAGAATTCT TAGACCACGT CAGCGAAGAG CATGGCTTTA CAATGAAGTC CTCATTTGAA ACCAACTTGC TGCCGCTCAT TCTGAGTATC GTTAAACAAG AATTTGCTAT TACCGCTCTC CTAGAACTGG TGACACAACA TGAACAGGGC GTGGTGGGTA TTCCATTTGA ACCAAGCGTT AAGCTCGACC TTGCACTCGC GTGGCGAAAA CAAGGCTATT TATCCATTTC CGACCGTACT TTCATTGACT TTGTGAAGCG GTATGTTTGA
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Protein sequence | MESKQLKHFL AVAEHGNITH AAKALHIAQP ALSISIRKFE QSLGVTLFRR EEKKISLTKE GETLLVHAKR VIQQLHDAQL AIDELKGLAK GEVRLGTPSM MGSYFFPRIV MAFKSQYPDL KLTLVEAGTQ SIRRMLLNGQ LDIGVISCDD VPDDLETDHL FTSQMVAVVA PEHDLAQRST ITFDQFFEHD LVMFQHGYFH REFLDHVSEE HGFTMKSSFE TNLLPLILSI VKQEFAITAL LELVTQHEQG VVGIPFEPSV KLDLALAWRK QGYLSISDRT FIDFVKRYV
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