Gene VIBHAR_02130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02130 
Symbol 
ID5554725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2133504 
End bp2135303 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content47% 
IMG OID640907617 
Productoligopeptidase 
Protein accessionYP_001445322 
Protein GI156974415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR02290] oligoendopeptidase, pepF/M3 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTC CTAGCTGGGA TTTATCCATC GTTTATAACG ATCTCGCTGA CCCACGAATT 
CAAGATGACA TTGCCCTTGT AGAGCAATGC ATTGACCTAC TCAATAAACA GTCTGCGGAT
TGTAACTCTG TTGAAGTGAT GCAAAACGCA ATCTTAACCA GTGAGGCGGC AAGCCGTTTG
GCTGGCACTA TTGCGAACTT CGCTAACTGT TACGCGTCCG TGGATGCGAC AAATGCAGAG
GCGAAAGCAC TGCTGGGTCG TATGACGCGT ATTTTCTCTG AGCTTTCTCA AGCTTACAGT
GCTTTTGAGC TTAAATTGAC TCACGCTGAT GAAGAGTTCA TTACCCGCGT TTTGGAGCAT
GAAAATCCAG ACATCAGTGG TCAGGCGTTT TCAATCCTGA ACTCTCGCAA ACTGGCTGAC
ACACGTTTAA GCACCGAAGA AGAAAAGCTA CTGGCGGCAA TGAGCGTGGA TGGAAAATCT
GCGTGGGGTA AGTTATACAA CAACCTCACG GGCTCTTTGA AAGTGAAGCT TGACTACGCT
GATGGTGAAA GTGAAGAGCT TGGCTTCTCG CAAGCAGCAA GCATTCTTTA TGGTTCTGAA
TTTGATCGCC AAGAAGCTGC GTGGCGTGGC GTTCAAAAGG CGATGGCAAC ACATCAAGAA
TCTTTCGCTT CTATCCTTAA CGCGCTTTCA GGTTGGCGTT TAACAGAGAA TAAAAAGCGT
TCTACCAAAC GTGATGTCCA TTTCCTTGAT CCAAGCTTAC ATGGCAGCCG AATTAAAGCG
GAAACATTGG ATGCCATGAT GAAAGTCGCT AAAGACAGCC GTGAGATTGG TCAAAAGGCC
GGTTTGCTAA TGGCGAAGGT CCATGGTTTG GATGAGATGA AACCGTGGAA TCATCTTGCT
GCGATGCCTG CTATGAGTGG TGAAGCGAAA GTTTACCCTT TCGATGAAGC AATCGATGTC
ATTTGTGAAG CGTTTGAAAC CCTGAATCCA GATATGTCTG AGTTTGTCCG CATGATGGTA
CAAAACGGCT GGATTGATGC TGCGCCTAAT GCCAATAAAC GCCTTGGTGC ATACTGTACT
AAGCTGCCGG CGACGCGTAC GCCGCTTGTG TTTATGACGT GGAGTGGTAG CCGCTCAGAC
CTGATGACGC TAGCTCACGA GCTTGGTCAT GCCTTCCACA ACTGGGTGAT TCGTGATTTA
CCGCTTTGCC AAACGTACTA TCCAATGACG TTGGCAGAAA CCGCCTCGAT TTTCGCTGAA
AACATCGTTC GTGATCATCT GATTTCAAAA GCAGAATGTG TGGATGATAA GCTCGAAATG
CTGTGGGAAG AGCTCTCTTC AGCGTTAGCT CTGATGATCA ATATTCCAGT TCGTTACGAG
TTCGAAAAAG CTTTCTACGA GCGTCGCCAG GAGGGTGAAC TGACCGCTGA TGACTTCTGT
GAACTGATGT CAGAAACATG GAAAGATTGG TATGGCGATG TGATGAGCGA AGCTGACCCT
TATTTCTGGG CGAGCAAACT GCACTTCTCA ATTTCTGGGG TGAGCTTCTA CAACTATCCA
TACCTGTTCG GTTTCTTGTT CAGTAAAGGT ATCTACGCTC AACGTGATGC TAAAGGGGAG
CGCTTCTACG ATGATTATGT AGATCTATTG CGCGATACTG GCAACATGAT GGCAGAAGAG
GTTGTAGACA AGCATCTTTC AATGGATCTG ACGCAACCCG AATTCTGGCA GCAGAGTGTG
GAGCTAGTTC GTGACAAAGT AGACGAATTT GAACGTTTAC TCGCACAACG TGGTGAATAA
 
Protein sequence
MTAPSWDLSI VYNDLADPRI QDDIALVEQC IDLLNKQSAD CNSVEVMQNA ILTSEAASRL 
AGTIANFANC YASVDATNAE AKALLGRMTR IFSELSQAYS AFELKLTHAD EEFITRVLEH
ENPDISGQAF SILNSRKLAD TRLSTEEEKL LAAMSVDGKS AWGKLYNNLT GSLKVKLDYA
DGESEELGFS QAASILYGSE FDRQEAAWRG VQKAMATHQE SFASILNALS GWRLTENKKR
STKRDVHFLD PSLHGSRIKA ETLDAMMKVA KDSREIGQKA GLLMAKVHGL DEMKPWNHLA
AMPAMSGEAK VYPFDEAIDV ICEAFETLNP DMSEFVRMMV QNGWIDAAPN ANKRLGAYCT
KLPATRTPLV FMTWSGSRSD LMTLAHELGH AFHNWVIRDL PLCQTYYPMT LAETASIFAE
NIVRDHLISK AECVDDKLEM LWEELSSALA LMINIPVRYE FEKAFYERRQ EGELTADDFC
ELMSETWKDW YGDVMSEADP YFWASKLHFS ISGVSFYNYP YLFGFLFSKG IYAQRDAKGE
RFYDDYVDLL RDTGNMMAEE VVDKHLSMDL TQPEFWQQSV ELVRDKVDEF ERLLAQRGE