Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01954 |
Symbol | |
ID | 5553249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1956744 |
End bp | 1957409 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640907441 |
Product | hypothetical protein |
Protein accession | YP_001445146 |
Protein GI | 156974239 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA ATTGGAATGA CCTAGTAAAA GCTAGGATGA AAGAAGTTGG CATCACTCAG AACGCTCTTG CAGAAATGAT GGGAGTATCT CAGAGTGCGA TAGCTCATTG GCTCAACAAA AATAGAGAGC CAAGCATAGA GAACGTCGCT GCTATCATGA AGTGTGTTGG CTTAACTCAT ATGATGCTTG ATTCGGATGG TTTTATTGAC TATCCAGATG ACAGTGTTGC CAATGTCAAG AAGCTCGATA TACAGCCTAC ATATCAAAAA TCTTTTCCTG TCCTTAGTTC AGTTCAAGCA GGGCAATGGC ACGAAGCCAT CGAACCCTAT TCAATTGAAG AAATCAGCGA GTGGCACCCT ACTACAGAAC GTTGCAGTGA GCGTTGCTTT TGGCTGACGG TTCAAGGTGA TTCAATGACG TCACCAACAG GATTTAGCTT CCCTGAGGGA ACTATGGTGC TTGTGGACAC AGAGGTCGAC GCTGAGAACG GCAAGTTGGT GGTAGCAAAA CTGACTGATG TAAACGAAGC TACTTTCAAA AAATTCATTG TTGACAGCGG ACAGAAGTAC TTAAAGGCTC TCAACCCAGC ATTCCCAATC TTACCAATCA ATGGCAACTG TAAAATTATC GGTGTTGTAA TCGATGCTAA ACTGAAACTC TTCTAA
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Protein sequence | MKMNWNDLVK ARMKEVGITQ NALAEMMGVS QSAIAHWLNK NREPSIENVA AIMKCVGLTH MMLDSDGFID YPDDSVANVK KLDIQPTYQK SFPVLSSVQA GQWHEAIEPY SIEEISEWHP TTERCSERCF WLTVQGDSMT SPTGFSFPEG TMVLVDTEVD AENGKLVVAK LTDVNEATFK KFIVDSGQKY LKALNPAFPI LPINGNCKII GVVIDAKLKL F
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