Gene VIBHAR_01954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01954 
Symbol 
ID5553249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1956744 
End bp1957409 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID640907441 
Producthypothetical protein 
Protein accessionYP_001445146 
Protein GI156974239 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA ATTGGAATGA CCTAGTAAAA GCTAGGATGA AAGAAGTTGG CATCACTCAG 
AACGCTCTTG CAGAAATGAT GGGAGTATCT CAGAGTGCGA TAGCTCATTG GCTCAACAAA
AATAGAGAGC CAAGCATAGA GAACGTCGCT GCTATCATGA AGTGTGTTGG CTTAACTCAT
ATGATGCTTG ATTCGGATGG TTTTATTGAC TATCCAGATG ACAGTGTTGC CAATGTCAAG
AAGCTCGATA TACAGCCTAC ATATCAAAAA TCTTTTCCTG TCCTTAGTTC AGTTCAAGCA
GGGCAATGGC ACGAAGCCAT CGAACCCTAT TCAATTGAAG AAATCAGCGA GTGGCACCCT
ACTACAGAAC GTTGCAGTGA GCGTTGCTTT TGGCTGACGG TTCAAGGTGA TTCAATGACG
TCACCAACAG GATTTAGCTT CCCTGAGGGA ACTATGGTGC TTGTGGACAC AGAGGTCGAC
GCTGAGAACG GCAAGTTGGT GGTAGCAAAA CTGACTGATG TAAACGAAGC TACTTTCAAA
AAATTCATTG TTGACAGCGG ACAGAAGTAC TTAAAGGCTC TCAACCCAGC ATTCCCAATC
TTACCAATCA ATGGCAACTG TAAAATTATC GGTGTTGTAA TCGATGCTAA ACTGAAACTC
TTCTAA
 
Protein sequence
MKMNWNDLVK ARMKEVGITQ NALAEMMGVS QSAIAHWLNK NREPSIENVA AIMKCVGLTH 
MMLDSDGFID YPDDSVANVK KLDIQPTYQK SFPVLSSVQA GQWHEAIEPY SIEEISEWHP
TTERCSERCF WLTVQGDSMT SPTGFSFPEG TMVLVDTEVD AENGKLVVAK LTDVNEATFK
KFIVDSGQKY LKALNPAFPI LPINGNCKII GVVIDAKLKL F