Gene VIBHAR_01915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01915 
Symbol 
ID5555463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1924819 
End bp1926348 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content49% 
IMG OID640907402 
Productfumarate hydratase, class I 
Protein accessionYP_001445107 
Protein GI156974200 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCATG CAATGACGGT AATACGCACG CAGGATGTCA TCAGCAGTGT TGCTGATGCG 
CTACAGTATA TTTCTTACTA CCACCCGCTA GACTTTGTTC AAGCCCTTGA AAAAGCCTAC
CATCGTGAAG AGAGCCAAGC TGCGAAAGAC GCTATCGCTC AGATCCTAAT TAACTCCCGT
ATGTCGGCAG AAGGCCATCG ACCGATTTGT CAGGACACAG GTATCGTGAC TTGTTTCGTC
AATATCGGTA TGGGCGTTCA ATGGGACTCA ACCGACATGA CGGTTCAACA GATGGTGGAT
GAAGGCGTTC GACAAGCTTA CACGAATCCG GACAACCCAT TGCGTGCCTC GGTTCTGATG
GACCCTGCGG GCAAGCGAAT CAATACCAAA GACAACACGC CAGCGGTTGT ACATATCAAT
ATGGTGCCAG GCGATAAAGT TGAAATTCAA ATCGCGGCGA AAGGCGGCGG CTCTGAAAAC
AAAACCAAGA TGGTGATGCT AAACCCATCT GACGACATTG CAGAATGGGT AGAGAAAACC
CTACCAGCAA TGGGCGCAGG CTGGTGTCCA CCGGGCATGC TTGGCATTGG TATAGGCGGT
ACCGCTGAAA AAGCTGCGGT CTTGGCAAAA GAATCTCTGA TGGGGCACGT TGACATTCAA
GAACTGATCG ATCGTGGTCC TCAAAATGCG GAAGAAGAGC TTCGTCTTGA TATCTTCAAC
CGTGTAAACA AGCTGGGTAT TGGTGCGCAA GGCCTAGGTG GTTTAACAAC AGTTGTTGAC
GTAAAAATCA AAACCGCGCC AACCCATGCC GCGTCTAAGC CTGTGTGCTT GATTCCGAAC
TGTGCAGCGA CTCGTCACGT GCATTTCACT CTAGATGGCA ACGGTCCTGC TGAGCTAACG
CCACCGAAGC TAGAAGATTG GCCAGATATT ACTTGGGAAG CGGGCGAGAA CACACGTCGC
GTGAACTTAG ATACCGTGAC CAAAGAAGAA GTTCAAGAGT GGAAAACCGG TGAAACGGTT
CTGCTGTCGG GCAAAATTCT AACTGGTCGT GATGCTGCGC ATAAACGCAT TCAAGGCATG
CTAGAAGCGG GTGAAGGTTT ACCTGCTGGC GTTGATTTCA AGGGTAAGTT CATTTATTAC
GTTGGCCCGG TTGATGCCGT CGGTGATGAG GCCGTAGGTC CTGCAGGTCC AACAACCTCA
ACACGTATGG ATAAGTTCAC AGACATGATG TTAGAAGAAA CAGGCATTAT GGGCATGATC
GGTAAAGCAG AGCGCGGTCC TGCAACAGTT GAATCTATCA AGAACCACAA AGCGGTTTAC
TTAATGGCAG TTGGCGGCGC GGCGTACCTC GTTGCAAAAG CGATTAAGAA AGCTCGCGTG
GTGGCATTCG AAGACCTAGG CATGGAAGCA ATCTACGAGT TTGAAGTTGA AGATATGCCA
GTAACGGTTG CTGTGGATTC AAATGGCGCG AACGCTCACC AAATTGGTCC AGATACTTGG
AAAGTAAAAA TCCAAGAAAT GGAAGCGTAA
 
Protein sequence
MRHAMTVIRT QDVISSVADA LQYISYYHPL DFVQALEKAY HREESQAAKD AIAQILINSR 
MSAEGHRPIC QDTGIVTCFV NIGMGVQWDS TDMTVQQMVD EGVRQAYTNP DNPLRASVLM
DPAGKRINTK DNTPAVVHIN MVPGDKVEIQ IAAKGGGSEN KTKMVMLNPS DDIAEWVEKT
LPAMGAGWCP PGMLGIGIGG TAEKAAVLAK ESLMGHVDIQ ELIDRGPQNA EEELRLDIFN
RVNKLGIGAQ GLGGLTTVVD VKIKTAPTHA ASKPVCLIPN CAATRHVHFT LDGNGPAELT
PPKLEDWPDI TWEAGENTRR VNLDTVTKEE VQEWKTGETV LLSGKILTGR DAAHKRIQGM
LEAGEGLPAG VDFKGKFIYY VGPVDAVGDE AVGPAGPTTS TRMDKFTDMM LEETGIMGMI
GKAERGPATV ESIKNHKAVY LMAVGGAAYL VAKAIKKARV VAFEDLGMEA IYEFEVEDMP
VTVAVDSNGA NAHQIGPDTW KVKIQEMEA