Gene VIBHAR_01890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01890 
Symbol 
ID5553489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1903115 
End bp1904314 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content46% 
IMG OID640907378 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001445083 
Protein GI156974176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA TGTTTGAAAA AGTAGTTGCC GCTCCGGCTG ACCCTATTCT TGGACTAACT 
GAAGAGTTTA AAAAAGATAC TCGCGCTGAA AAAATCAACC TAGGCGTTGG TATTTACAAG
AACGAACAAG GTGAAACCCC TGTTCTTGCG ACTGTTAAAA AAGCCGAAGC CGCACTGATT
GAAACTGAAA AAACCAAATC TTACCTGACC ATCGAAGGTA CTGCAGAATA CGGCCTTGCC
GTGCAAAAAC TGCTTTTCGG TGCTGATGCT GAAATCGTCG CAGACAAACG CGCTAAAACA
GCACAAGCTC CAGGTGGTAC TGGTGCATTA CGCGTTGCAG GTGAATTTAT TAAGCGCCAA
CTTGGTAACG TTAAAGTGTG GATCAGTAAC CCGACTTGGG CTAACCACAA TGGCGTATTC
ACTGCCGCAG GTATTGAGAC AGCACAATAC AGCTACTACA ACGCAGAAAC CAAAGACAAA
GACTTCGACG CAATGCTGAC TGACCTTCAG TCTGCTTCCG AAGGCGACGT GGTTCTACTG
CACGGCTGCT GCCACAACCC AACAGGTATC GACCCAACTG CAGAAGAGTG GGAAACACTG
GCTAAGCTGG TTGCTGATAA AAAACTACTT CCTCTATTCG ACTTTGCATA CCAAGGTTTC
GCGAAAGGTG TAGAAGAAGA TGCAGCAGGT CTACGTACTT TCGCTAAGTA CAACAAAGAG
ATCCTAGTAG CGAGCTCTTT CTCTAAGAAC TTTGGCCTTT ACAACGAGCG TGTTGGTGCA
TTCACTTTAG TTGCAGAATC AGAAGAAGTG GCAACAACAG CATTTTCACA AGTCAAAGCA
ATCATCCGTT CTATTTACTC TAACCCACCA GCTCACGGCA GTGCGGTTGT AACTCATATT
CTTGGTGACG CAGCACTGCG TGCAGAATGG GAAGCAGAAG TAGCAGAAAT GCGTGACCGT
ATCCAAGAGA TGCGTGAACT GTTTGTAGCA ACTCTGAAAG CAGAAGGTGT CGACGCAGAC
TTTAGCTTCA TCGAGCGTCA AAACGGCATG TTCTCGTTCT CTGGTCTGTC TAAAGAACAA
GTAAACCGTC TGAAAGAAGA GTTCGCAATC TACATTGTTG GCTCTGGCCG CATCAGTGTA
GCGGGCATGA CGAAGTCAAA CATGGGTCCT CTATGTAAAG GCATTGCGGC GGTTCTATAA
 
Protein sequence
MKIMFEKVVA APADPILGLT EEFKKDTRAE KINLGVGIYK NEQGETPVLA TVKKAEAALI 
ETEKTKSYLT IEGTAEYGLA VQKLLFGADA EIVADKRAKT AQAPGGTGAL RVAGEFIKRQ
LGNVKVWISN PTWANHNGVF TAAGIETAQY SYYNAETKDK DFDAMLTDLQ SASEGDVVLL
HGCCHNPTGI DPTAEEWETL AKLVADKKLL PLFDFAYQGF AKGVEEDAAG LRTFAKYNKE
ILVASSFSKN FGLYNERVGA FTLVAESEEV ATTAFSQVKA IIRSIYSNPP AHGSAVVTHI
LGDAALRAEW EAEVAEMRDR IQEMRELFVA TLKAEGVDAD FSFIERQNGM FSFSGLSKEQ
VNRLKEEFAI YIVGSGRISV AGMTKSNMGP LCKGIAAVL