Gene VIBHAR_01817 details

Gene Information

• Locus tag: VIBHAR_01817
• ID: 5553126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1831669
• End bp: 1832397
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640907308
• Product: hypothetical protein
• Protein accession: YP_001445013
• Protein GI: 156974106
• COG category: [S] Function unknown
• COG ID: [COG3496] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGCCA TCGACGTAGA TGAACTCGAG GTGCTGGAGA AAAATGTTTG GGGCTTTGGG 
TCACGCTGGT GGCATTGGGC ACGTTTTAAG CGCAGTGATT ACATTGGTGG TAAAGGATGC 
ATTAAGTCAG CCGTTCAAGA CAAACTGGAA GCGCTAACAG GTGTTCGTTT GACGGGAAAA 
GTGGTTGCCG TTTGTCACCT ACGTTACTTA GGGCTCTATT TCAGTCCGGT TAATTTCTAC 
TACGTTTATA ACAAGGAGGG CGAGTGGAAG TACCTGCTGG CAGAGGTCAG CAACACCCCT 
TGGAATGAAC GTCATTATTA CGCGATAGCG GCAGACGAAC AGGATGAAAA TTTTGGTTGG 
GAGCAAGACA AAGCGTTTCA TGTCTCGCCG TTTAATCCAA TCGACCAACG CTACCATTGG 
AAGATCAAAC CTTTGACAGA CAAGTTGAAT ATCCATCTTG AATGTCACAA AGGTGAAAAA 
CATTTTGATG CCACCATGGC AATGAAAGCG CAGCCACTTT CAAGTAAAAC CTTATTGAAA 
TGCTTGATCG TTACGCCGAT TCAAACGGTA AAAGTCATGG TTGGTATTTA CTGGCACGCT 
CTAAAACTTT GGATTAAAGG CGCGCCTTTT TACTCACACC CTAAATATGC TCAACCAAAA 
AAGACGGGAG CCGAGCCGGT GAGTAAAGAC GAAAAGAATA ATAAGCACAA GGAGAACTCT 
GCATGTTAA 

 

Protein sequence

MPAIDVDELE VLEKNVWGFG SRWWHWARFK RSDYIGGKGC IKSAVQDKLE ALTGVRLTGK 
VVAVCHLRYL GLYFSPVNFY YVYNKEGEWK YLLAEVSNTP WNERHYYAIA ADEQDENFGW 
EQDKAFHVSP FNPIDQRYHW KIKPLTDKLN IHLECHKGEK HFDATMAMKA QPLSSKTLLK 
CLIVTPIQTV KVMVGIYWHA LKLWIKGAPF YSHPKYAQPK KTGAEPVSKD EKNNKHKENS 
AC