Gene VIBHAR_01813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01813 
Symbol 
ID5552785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1828009 
End bp1828878 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID640907304 
Productheat shock protein HtpX 
Protein accessionYP_001445009 
Protein GI156974102 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA TTATGTTATT CCTAGCAACT AACCTAGCAG TCGTGCTAGT GCTTAGTGTT 
GTTCTGAATA TTGTTTACGC TGTAACTGGA ATGCAGCCAG GCAGTCTGTC TGGTCTACTT
GTCATGGCCG CCGTGTTTGG TTTTGGTGGC GCGTTTATCT CGCTAATGAT GTCGAAAGGC
ATGGCTCTGC GCTCTGTGGG TGGCATGGTC ATCGAAAGCC CTCGTAACGA GACAGAGCAC
TGGCTTCTTG AAACAGTTGG TCGCCAAGCT CAGCAAGCGG GCATTGGTAT GCCAACGGTC
GCGATTTACG AAGCGGCAGA CATCAACGCA TTCGCAACAG GCGCAAAGCG TGACGATTCA
TTGGTTGCTG TTTCTACAGG CCTTCTACAT AACATGACTC GCGATGAAGC AGAAGCGGTG
CTAGCGCACG AAGTGAGTCA CATTGCGAAT GGTGACATGG TTACCATGAC GCTAATGCAA
GGTGTGGTGA ACACCTTCGT TATCTTCCTA TCACGCTTCA TTGCCAACAT CGTTGCTTCT
AACGACGATG AGGAAGGCCA GGGCACCAAC ATGATGGTTT ACTTTGGTGT GTCTATGGTG
CTTGAGTTGG TATTTGGCTT CTTAGCAAGC TTCCTAACTA TGTGGTACAG CCGTCACCGC
GAATTCCATG CAGATGCCGG TGCAGCTCAG TTAGTGGGTA AAGAGAAGAT GATTGCTGCG
CTAGAGCGTT TGAAAATGAG CCACGAATCG CAACTGGATG GCACAATGAT GGCATTTGGT
ATCAACGGTA AGCGTTCGAT GACTGAGCTT CTAATGAGCC ACCCACCGCT AGACAAGCGT
ATTTCGGCAC TACGTAGCCA ACAATACTAA
 
Protein sequence
MKRIMLFLAT NLAVVLVLSV VLNIVYAVTG MQPGSLSGLL VMAAVFGFGG AFISLMMSKG 
MALRSVGGMV IESPRNETEH WLLETVGRQA QQAGIGMPTV AIYEAADINA FATGAKRDDS
LVAVSTGLLH NMTRDEAEAV LAHEVSHIAN GDMVTMTLMQ GVVNTFVIFL SRFIANIVAS
NDDEEGQGTN MMVYFGVSMV LELVFGFLAS FLTMWYSRHR EFHADAGAAQ LVGKEKMIAA
LERLKMSHES QLDGTMMAFG INGKRSMTEL LMSHPPLDKR ISALRSQQY