Gene VIBHAR_01723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01723 
Symbol 
ID5555827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1729485 
End bp1730534 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content48% 
IMG OID640907214 
ProductType III secretory pathway, component EscU 
Protein accessionYP_001444919 
Protein GI156974012 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4792] Type III secretory pathway, component EscU 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB
[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAG AAAAAACAGA ACTCCCCACC CCGAAAAAAC TTCGGGATGC CCGGCAAAAA 
GGGCAAGTCG CTAAAAGTCA GGAAGTCGTC TCATCGGCCT TAATCCTAGC CCTAATTGCC 
GTCCTATTTG CTTTTGCTGA CTACTATATG TCGCACATCT CTGCCCTACT TTTATTGCCG 
AGTGAGTTGG CTTATCAAGG GTTTCAGGAT GCGTTGCTTG ACGTAGCCAT CGCCATCGCC 
AAAGAAATGG TTTACTTGCT GGCACCGATC CTGATCGTGG CGGCATTGAT CGCCATCATG 
TCGAACATGG GGCAATTCGG CTTGCTGTTT AGTGGTGAAT CCGTCAAACC AGATATCAAA 
AAGATCAACC CTGTCGAAGG GGCAAAACGA ATTTTCTCGC TAAAGAGCAT CATTGAGTTT 
ATTAAATCGA TTCTTAAAGT GTCGCTCCTT TCCTGCATTA TTTGGGTCAC TCTGCGGGGC 
AACTTAAACA CGCTACTGCA AATCCCGACA TGCGGATTAG AGTGTGTACC GACCATCACC 
GGCGTATTGG TGAAACAACT CATGATCATC TCTTCCGTCG GCTTTATTGT GATTGCAGCT 
GCCGATTACG CATATCAAAA ATTCGACCAC ACCAAGCAGC TGAAGATGAC TAAAGACGAG 
GTCAAACGCG AATATAAAGA GATGGAAGGC AGCCCGGAAA TCAAGAGTAA GCGTCGTCAG 
TTGCACCAAG AGCTGCAAGC TTCGAACCAA AGAGATAACG TTAAACGTTC GAATGTGTTG 
GTCACGAACC CAACCCACAT CGCGATTGGT TTGTACTACA AAAAGGGCGA AACACCGCTG 
CCTGTGATAA CCCTCAAAGA AACCGATGCG ATGGCAAAAC GTATGATCGC GATAGCCCAC 
GAAGAAGGCA TCCCTGTGAT GCAAAAAGTA CCACTCGCAC GTGCTCTTTA TGCCGATGGT 
CAGTTAAACC AGTACATTCC AGGCGATCTT ATTGAAGCCA CCGCTGAGAT CCTGCGTTGG 
GTTGCGTCTC TTGAGCAGTC TGAGGAATAG
 
Protein sequence
MSGEKTELPT PKKLRDARQK GQVAKSQEVV SSALILALIA VLFAFADYYM SHISALLLLP 
SELAYQGFQD ALLDVAIAIA KEMVYLLAPI LIVAALIAIM SNMGQFGLLF SGESVKPDIK 
KINPVEGAKR IFSLKSIIEF IKSILKVSLL SCIIWVTLRG NLNTLLQIPT CGLECVPTIT 
GVLVKQLMII SSVGFIVIAA ADYAYQKFDH TKQLKMTKDE VKREYKEMEG SPEIKSKRRQ 
LHQELQASNQ RDNVKRSNVL VTNPTHIAIG LYYKKGETPL PVITLKETDA MAKRMIAIAH 
EEGIPVMQKV PLARALYADG QLNQYIPGDL IEATAEILRW VASLEQSEE