| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01610 |
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| Symbol | tolB |
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| ID | 5553148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1620363 |
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| End bp | 1621691 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640907101 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001444807 |
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| Protein GI | 156973900 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAC TGCTTGGCAG TCTGACGAGT GTAGCTCACG CTGCATTAGA GCTGGTGATT
ACCGATGGTA TTGATTCAGC ACGACCAGTT GCTGTTGTTC CATTCAAATG GGAAGGCAGT
GAACCGCTTC CTACCGATAT TTCTGCTGTG ATTGCTTCTG ACTTGCAACG CAGTGGTAAA
TTCAGCCCGG TACCAACCAG CAAAATGCCC CAAACGCCAT TCAACGAATC AGAGGTGAAC
TTTGATGCGT GGACCGGCTT AGGTGTGGAC GCATTGCTTA CTGGCTCAAT CAAAAAGAAC
GAGCAGGGTA ACTACGTAGT TAACTACCAA TTGGTTGACG TAGTGCGCGG CCAGCTAACT
GGTGGTAAGA GCAAAGCATT GGGTGGTGAC GGTGAACTGG TCCTTTCTAA AGATCATGTT
CTGTTCAACA AGGTTGCAAC AGTTGAAGGC CCACGCATGC GTGAATACGC ACACCGAATC
TCTGACTTGG TTTACGAGCA GCTGACGGGT GAACGTGGTG CGTTTATGAC GCGTATTGCT
TATGTGGTAG TGAACGATAA AGATAACTTC CCTTACCAAC TTCGTGTTGC GGATTACGAC
GGTTACAACG AGCGTTTAGT TCTACGTTCT AAGCAGCCAC TGATGTCTCC TGCATGGTCT
CCAGATGGTC AAAAGCTGGC TTATGTTAGC TTCCAAAATG GCCAAGCTGA AATCTTCATC
ATGAACATCT ATACCGGCGA GCGCGAGAAG ATTACTTCAT ACCCTCGTCA CAATGGTGCG
CCAAGATTCT CTCCAGATGG CAGCCAGTTA GCACTGGTAC TTTCTAAGAC TGGCTCGCTT
CAGGTATACA CTTTGGATCT GAAAACTCGC AAGCTGACAC AAATTACGCG TGGCAGATCA
AATAATACAG AACCGTTCTG GCACCCTGAT GGTAAATCAC TGATTTTCAC ATCTGACAGG
GGTGGTAAAC CTCAGATTTA TCAAGTAGAT TTGGGCAGCG GTTCTACTAA CCGTTTGACT
TGGCAAGGCA GCCAAAACTT AGGTGGTCAA ATCACCCCTG ATGGTCGATT CCTAGTCATG
GTGAATCGCA GTGATTCGGG TTTCAACTTG GCTAAACAAG ATTTGGAAAC AGGCGCTCTT
CAGGTTCTAA CAAAAACATT GCTTGATGAG TCTCCGAGCA TTGCCCCAAA TGGTGGCATG
GTTATCTATA GCTCGATTTA CAACAAGAAA AACGTACTAT CGATGGTGTC AATTGATGGT
CGATTTAAAG CTAGATTACC GGCAACAAAT GGGCGTGTAA GAGCTCCCGC ATGGTCACCG
TTTTTGTAG
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| Protein sequence | MFVLLGSLTS VAHAALELVI TDGIDSARPV AVVPFKWEGS EPLPTDISAV IASDLQRSGK
FSPVPTSKMP QTPFNESEVN FDAWTGLGVD ALLTGSIKKN EQGNYVVNYQ LVDVVRGQLT
GGKSKALGGD GELVLSKDHV LFNKVATVEG PRMREYAHRI SDLVYEQLTG ERGAFMTRIA
YVVVNDKDNF PYQLRVADYD GYNERLVLRS KQPLMSPAWS PDGQKLAYVS FQNGQAEIFI
MNIYTGEREK ITSYPRHNGA PRFSPDGSQL ALVLSKTGSL QVYTLDLKTR KLTQITRGRS
NNTEPFWHPD GKSLIFTSDR GGKPQIYQVD LGSGSTNRLT WQGSQNLGGQ ITPDGRFLVM
VNRSDSGFNL AKQDLETGAL QVLTKTLLDE SPSIAPNGGM VIYSSIYNKK NVLSMVSIDG
RFKARLPATN GRVRAPAWSP FL
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