Gene VIBHAR_01607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01607 
Symbol 
ID5553283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1618141 
End bp1618839 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640907098 
Producthypothetical protein 
Protein accessionYP_001444804 
Protein GI156973897 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGCTG ATATTTCCAT TTTAGATCTC TTTCTTCAGG CCAGTCTGTT GGTAAAGCTT 
GTGATGTTGA CACTGCTAGG CATGTCAATC GCATCATGGG CTATGATCAT TAAGCGCAGC
AAAGTCTTAT CTCAAGCATC AAAAGATGCA GAGTCATTTG AAGACAAATT TTGGTCGGGC
ACGGATCTTT CACAGCTTTA TCAAAAAGTG AAAGGCCGCA AAGACGACAT CACAGGCACA
GAAGAAATCT TCTACGCAGG TTTTACCGAG TTCGCACGCC TACGTAAGAG CAACGCAAAC
TCACCAGCTT ACATCATGGA AGGTACTGGC CGTGCAATGC GCGTCGCCGT TGCTCGTGAA
GTTGATGAAC TTGAAACCAG CCTACCATTC CTTGCAACGG TTGGTTCTAT CAGTCCATAC
ATTGGTCTGT TTGGTACCGT TTGGGGCATC ATGCACGCGT TCATCGCTTT AGGTGAAGTG
AAGCAAGCAA CGCTTTCAAT GGTAGCGCCA GGTATCGCAG AAGCACTGAT TGCGACAGCG
ATGGGCCTAT TCGCGGCAAT CCCTGCGGTA ATGGCTTACA ACCGTCTAAG TAACAAAGTA
AGTAAGCTAG AACACACATA CGCAACTTTC TCTGAAGAAT TCCACAGCAT TCTGCACCGT
CAAGCGATGG CGGGTCGAGA CAGCGCAAGT AAGGAATAA
 
Protein sequence
MTADISILDL FLQASLLVKL VMLTLLGMSI ASWAMIIKRS KVLSQASKDA ESFEDKFWSG 
TDLSQLYQKV KGRKDDITGT EEIFYAGFTE FARLRKSNAN SPAYIMEGTG RAMRVAVARE
VDELETSLPF LATVGSISPY IGLFGTVWGI MHAFIALGEV KQATLSMVAP GIAEALIATA
MGLFAAIPAV MAYNRLSNKV SKLEHTYATF SEEFHSILHR QAMAGRDSAS KE