| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01597 |
|---|
| Symbol | aspS |
|---|
| ID | 5553318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1608251 |
|---|
| End bp | 1610029 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640907088 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001444794 |
|---|
| Protein GI | 156973887 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCC ATTACTGTGG TCACCTGAAC AAGTCCCTTG CAGGACAAAC TGTAGAACTT
TGCGGCTGGG TTAACCGTCG TCGTGATTTA GGCGGTCTTA TTTTTATCGA TATGCGAGAT
CGCGAAGGTA TCGTTCAGGT AGTTGTTGAT CCAGATATGG CAGATGCGTA TGAAGTGGCT
AACACACTTC GTAATGAATT CTGTATCAAG CTAACTGGTG AAGTTCGCGT TCGTCCAGAA
AGCCAAGTAA ACAAAGACAT GGCAACAGGT GAAGTTGAGA TTCTTGCAAA AGGTCTTGAA
ATCATCAACC GCTCTGACGT TCTGCCTCTA GACTTCAACC AAAAGAACTC TGAAGAGCAA
CGTCTGAAGT ACCGTTACCT AGATCTACGT CGTCCAGAAA TGAGCGACCG CATCAAGCTA
CGTGCTAAAG CGTCTAGCTT TGTTCGTCGT TTCCTAGATG ACAACGGCTT CCTAGACATC
GAAACACCAG TACTAACAAA AGCGACACCA GAAGGCGCTC GTGACTACCT AGTACCTAGC
CGTGTTCACA AAGGCAGCTT CTACGCGCTT CCTCAGTCTC CACAGCTATT CAAACAGCTT
CTAATGATGT CTGGTTTTGA TCGTTACTAC CAAATCGTTA AGTGTTTCCG TGATGAAGAC
TTGCGTGCTG ACCGTCAACC AGAATTCACT CAGATCGATA TCGAAACGTC ATTCATGACG
GCAGACCAAG TTCGTGCCAC GACTGAGAAA ATGGTTCGTG AAATGTGGCA AGAGCTACTG
AACGTTGACC TAGGTGAATT CCCAGTAATG CCGTTCAGCG AAGCGATTCG TCGTTTCGGT
TCTGACAAAC CAGACCTGCG TAACCCACTA GAACTAGTAG ACGTTGCTGA CCTAGTGAAA
GACGTTGAGT TCAAAGTATT CTCTGGTCCA GCAAACGACG AGAAAGGTCG CGTTGCAGTT
ATCCGCGTAC CAGGTGGTGC TGAGCTTACT CGTAAGCAAA TCGACGGCTA CGCAGAATTC
GTAGGTATCT ACGGTGCGAA AGGTCTAGCA TGGATGAAGG TTAACGACCG TGCAGCTGGC
ATGGAAGGTA TCCAATCTCC TGTAGCTAAA TTCCTAAACG AAGACGTAAT CAACGGCATC
CTAGATCGTA CTCAAGCGGA ATCTGGCGAC ATCATCCTGT TTGGCGCAGA CAAAGCTAAC
ATCGTTGCTG AAGCACTAGG CGCACTTCGT CTTAAACTTG GTAAAGACCT AGATATAACT
AAAGAAGGCA CATGGGCTCC TCTATGGGTT GTTGACTTCC CAATGTTCGA AGAAGACGAC
GAAGGTAACC TACACGCAAT GCACCACCCA TTCACATCAC CTCTAGGTGT GACTGCGGAA
GAGCTAAAAG CGAACCCAGC AGCGGCTAAC TCAAACGCAT ACGACATGGT TCTAAACGGC
TATGAAGTGG GCGGTGGTTC TGTACGTATC CACAACGCAG AAATGCAAGC AGCAGTATTC
GATATCCTAG GCATCAATGC AGAAGAGCAA CAACTGAAAT TCGGCTTCCT ACTAGACGCT
CTGAAATTCG GTACGCCTCC ACACGCTGGT CTTGCATTCG GTCTAGACCG TCTAGTGATG
CTGCTATGTG GTACAGAAAA TATCCGTGAT GTTATCGCGT TCCCTAAAAC AACGGCGGCG
GCGTGTCTAC TAACAGACGC ACCAAGCCTT GCAAACCCAG CGGCTCTAGA AGAGCTGGCA
ATTGCAGTAA CAGTTGCGAA AGAAAAAGAC GCAGAATAA
|
|---|
| Protein sequence | MRTHYCGHLN KSLAGQTVEL CGWVNRRRDL GGLIFIDMRD REGIVQVVVD PDMADAYEVA
NTLRNEFCIK LTGEVRVRPE SQVNKDMATG EVEILAKGLE IINRSDVLPL DFNQKNSEEQ
RLKYRYLDLR RPEMSDRIKL RAKASSFVRR FLDDNGFLDI ETPVLTKATP EGARDYLVPS
RVHKGSFYAL PQSPQLFKQL LMMSGFDRYY QIVKCFRDED LRADRQPEFT QIDIETSFMT
ADQVRATTEK MVREMWQELL NVDLGEFPVM PFSEAIRRFG SDKPDLRNPL ELVDVADLVK
DVEFKVFSGP ANDEKGRVAV IRVPGGAELT RKQIDGYAEF VGIYGAKGLA WMKVNDRAAG
MEGIQSPVAK FLNEDVINGI LDRTQAESGD IILFGADKAN IVAEALGALR LKLGKDLDIT
KEGTWAPLWV VDFPMFEEDD EGNLHAMHHP FTSPLGVTAE ELKANPAAAN SNAYDMVLNG
YEVGGGSVRI HNAEMQAAVF DILGINAEEQ QLKFGFLLDA LKFGTPPHAG LAFGLDRLVM
LLCGTENIRD VIAFPKTTAA ACLLTDAPSL ANPAALEELA IAVTVAKEKD AE
|
|---|
| |