Gene VIBHAR_01583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01583 
Symbol 
ID5553398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1590691 
End bp1591404 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID640907074 
ProductDNA-binding transcriptional regulator TorR 
Protein accessionYP_001444780 
Protein GI156973873 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATC ACGTATTAGT CGTAGAAGAT GATGTTGTAA CTCGTAGTAA GCTTGCGGGC 
TATTTCCAAA ACGAAGGCTA CAAAGTCAGT GAAGCAGAAA GTGGCGCAGA GATGCGTGAA
GTGCTGCAAG GTGGCGATGT AGATTTAATT ATGCTGGATA TTAACTTGCC CGGCGAAGAC
GGCCTGATGC TTACGCGTGA ATTACGCAGC CAATCAGATA TCGGCATCAT ATTAGTGACA
GGACGCACGG ATAGCATTGA CAAAATCGTT GGCCTAGAAA TGGGCGCAGA CGATTATGTG
ACAAAGCCTT TTGAACTAAG GGAATTACTG GTTCGCGTTA AGAACTTGCT ATGGCGCATT
TCTGCGGCTC GCAACGGTTC TCAAAAAGCA GCCAGCGACA CTAATGAAGA ACACATTGTG
CGCTTCGGTG AGTGGACGTT TGATATTCAA CGTCGTGCTC TAAGCCGTAA TGGTGAGCCA
GTGAAACTAA CGAAAGCAGA ATATGAGCTG TTAGTTGCAC TGTCTTCGTA CCCAAATCAG
GTACTTAGCC GTGAGCGTAT TTTGAATATG ATCAGCCACC GAGTGGATGC GCCAAACGAT
CGTACTATCG ACGTTTTGAT TCGCCGCATG CGAGCTAAGA TGGAGTTTGA CCCTAAGAAC
CCACAAATCT TTGTGACGGT TCACGGTGAA GGCTACATGT TCGCTGGTGA CTAA
 
Protein sequence
MSYHVLVVED DVVTRSKLAG YFQNEGYKVS EAESGAEMRE VLQGGDVDLI MLDINLPGED 
GLMLTRELRS QSDIGIILVT GRTDSIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI
SAARNGSQKA ASDTNEEHIV RFGEWTFDIQ RRALSRNGEP VKLTKAEYEL LVALSSYPNQ
VLSRERILNM ISHRVDAPND RTIDVLIRRM RAKMEFDPKN PQIFVTVHGE GYMFAGD