| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01574 |
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| Symbol | |
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| ID | 5553419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1579365 |
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| End bp | 1581995 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640907065 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001444771 |
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| Protein GI | 156973864 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAT CGCTCGTTAT AGTGGAGTCA CCAGCCAAGG CTAAGACGAT AAATAAATAT
CTTGGTAAAG ACTTTATTGT TAAGTCTAGT GTTGGTCACG TGCGTGATCT GCCTACGGCC
GGTCAAAGCA CTGGTGAGAA AAAAGCCGCT GCCATTTCTA CAAAAGGAAT GAGCCCGGAA
GAGAAAGCGC GTGTCAAAAA AGAAAAAGAC CGCAAAGCGC TAATCAAAAA AATGGGGATT
AACCCATATC ATGACTGGGA TGCGAATTAC CAAATCCTTC CAGGCAAAGA AAAAGTCGTA
AGCGAACTGC AAAAATTAGC CAAAGACGCT GATTACGTTT ACCTCGCAAC CGATTTGGAC
CGCGAGGGGG AAGCAATCGC ATGGCACCTT CGTGAGATCA TCGGTGGCGA TGAAGAGCGA
TACAAGCGCG TAGTGTTTAA CGAGATCACT AAGAATGCTA TCCAACAAGC TTTCCAGACA
CCTGGCGAGC TAAACATGGA CGGTGTTAAC GCACAGCAAG CACGTCGATT CATGGACCGA
GTAGTAGGTT TCATGGTTTC TCCATTGCTA TGGAAGAAAG TTGCGCGTGG TCTTTCAGCA
GGTCGCGTAC AATCAGTAGC GGTGAAGCTA TTGGTTGAGC GTGAGCGTGA AATCAACGCT
TTCATTCCAG AAGAGTTCTG GGATATCAAC GCGAATACGC ACACCAAAGA CAAGACCGCA
TTCAAATTGC TTGTTGCACA AAAAGATGGC GTTGCGTTTA AGCCAGTCAA CGAGGCAGAG
ACCAAAGCAG CGCTTTCGGT ACTGGAAAAA GCGAGCTACG AAGTTTGTAA GCGTGAAGAC
CGCCCAACAA AGAGTAAGCC TTCTGCACCG TACATCACTT CAACACTGCA ACAAGCGGCA
AGCACTCGTC TTGGCTACGG CGTTAAGAAG ACAATGATGC TCGCTCAACG TTTGTATGAA
GCGGGTTACA TCACCTATAT GCGTACCGAC TCTACCAACT TGAGTGCGGA AGCTGTAGAT
GCGGTTCGTG GATTCATCGG CTCTGAGTAT GGTGACAAGT ATCTTCCTGC TAAACCGCTA
ACATACGGTA GCAAAGAGGG CGCACAAGAA GCGCACGAAG CGATTCGTCC TTCCGATGTT
TCTGTGAAAT CAGAAGATCT ACAAGGTGTT GATGCGGACG CACACAAACT TTACTCATTG
ATCTGGAATC AGTTCGTTGC TTGTCAAATG ACGCCAGCAG AATACGATTC AACAACAATC
AGTGTGAAAG CGGCAGAATA CACGCTAAAA GCGAAAGGCC GTATCCTTAA GTTTGACGGT
TGGACTCGCG TACAACGCCC AATGGGTAAA AACGAAGATA CGATTCTTCC AGCTGTTCAG
CTAGGCGAAA AGCTAGACTT AGAGTCATTA GAGCCTAAAC AGCACTTTAC TAAGCCACCT
GCACGTTTTA CAGAAGCGGC ATTGGTTAAA GAGCTTGAGA AGCGCGGCAT TGGCCGTCCT
TCAACTTACG CTTCAATCAT CTCTACGATC CAAGATCGCG GTTACGTGAA AGTTGAACAG
CGTCGTTTCT ATGCAGAAAA GATGGGCGAG ATCGTTACTG ACCGCCTAGA TGACAGCTTT
AACGACCTAA TGAACTACGA CTTCACGGCT CGTATGGAAC AGAAGCTTGA CCAAATCGCA
GAAGGCGATG TGATGTGGAA AGATGTTCTA GACAACTTCT TCACAGACTT CACTGGCGAT
CTTGAGAAAG CGGAACAGGA CGAAAACGAA GGCGGCATGA AACTGAATCA CATTGTGATG
ACAGATATTG AGTGTCCAAC TTGTGGTCGT CCAATGGGTA TTCGTACTGC GTCTACCGGT
GTGTTCCTTG GCTGTTCTGG TTACGCATTG CCACCTAAAG AGCGTTGTAA GACAACGATT
AACTTAGGTG ACGAAGATGG CATTATCAAT GTTCTAGAAG AAGATGTGGA AACTGCAGCA
CTGCGTGCGA AGAAGCGTTG TCCTATCTGT GAAACAGCGA TGGATGCATA CCTGATCGAC
GATAAGCGTA AGATGCACGT TTGTGGTAAC AACCCGAACT GTGAAGGCTA CATCGTTGAA
CACGGCGAGT TCAAAGTGAA AGGCTACGAT GGCCCAGTTG TTGAGTGTGA CAAGTGTGGT
TCTGACATGG TGCTTAAAAA CGGTCGCTTC GGTAAATACA TGGACTGTAC GAGTGAGACG
TGTAAGAACA CTCGTAAGAT TCTGAAGAAT GGCGAAGTTG CGCCACCGAA GGAAGACCCA
GTTCATTTCC CTGAACTGCC ATGTGAAAAC TCGGACGCTT ACTTTGTTCT GCGTGATGGT
GCTTCTGGCC TATTTATGGC AGCAAGCAAC TTCCCTAAAT CACGTGAAAC TCGTGCTCCG
TTGGTGTCTG AACTGGCTCG CTTCGAAGAA CGTCTTCCGG AGAAGTTTAA GTACCTAACG
ACAGCGCCAG CAGCGGATCC AGATGGTCGC CCTGCAGTGG TTCGCTTTAG CCGTAAGAGC
AAAGAAAACT ACGTGCGTAC TGAAGACAAT GGCAAACCAA GTGGTTGGAC TGCGTTGTTT
GTTGACGGTA AGTGGGAAAT CACAGATAAG CGCAAAAAAG CAAAAGCTTA A
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGKDFIVKSS VGHVRDLPTA GQSTGEKKAA AISTKGMSPE
EKARVKKEKD RKALIKKMGI NPYHDWDANY QILPGKEKVV SELQKLAKDA DYVYLATDLD
REGEAIAWHL REIIGGDEER YKRVVFNEIT KNAIQQAFQT PGELNMDGVN AQQARRFMDR
VVGFMVSPLL WKKVARGLSA GRVQSVAVKL LVEREREINA FIPEEFWDIN ANTHTKDKTA
FKLLVAQKDG VAFKPVNEAE TKAALSVLEK ASYEVCKRED RPTKSKPSAP YITSTLQQAA
STRLGYGVKK TMMLAQRLYE AGYITYMRTD STNLSAEAVD AVRGFIGSEY GDKYLPAKPL
TYGSKEGAQE AHEAIRPSDV SVKSEDLQGV DADAHKLYSL IWNQFVACQM TPAEYDSTTI
SVKAAEYTLK AKGRILKFDG WTRVQRPMGK NEDTILPAVQ LGEKLDLESL EPKQHFTKPP
ARFTEAALVK ELEKRGIGRP STYASIISTI QDRGYVKVEQ RRFYAEKMGE IVTDRLDDSF
NDLMNYDFTA RMEQKLDQIA EGDVMWKDVL DNFFTDFTGD LEKAEQDENE GGMKLNHIVM
TDIECPTCGR PMGIRTASTG VFLGCSGYAL PPKERCKTTI NLGDEDGIIN VLEEDVETAA
LRAKKRCPIC ETAMDAYLID DKRKMHVCGN NPNCEGYIVE HGEFKVKGYD GPVVECDKCG
SDMVLKNGRF GKYMDCTSET CKNTRKILKN GEVAPPKEDP VHFPELPCEN SDAYFVLRDG
ASGLFMAASN FPKSRETRAP LVSELARFEE RLPEKFKYLT TAPAADPDGR PAVVRFSRKS
KENYVRTEDN GKPSGWTALF VDGKWEITDK RKKAKA
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