| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01532 |
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| Symbol | |
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| ID | 5553617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1534460 |
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| End bp | 1535683 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640907023 |
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| Product | outer membrane-specific lipoprotein transporter subunit LolE |
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| Protein accession | YP_001444729 |
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| Protein GI | 156973822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family
[TIGR02213] lipoprotein releasing system, transmembrane protein LolE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGTG GCCGTTTTAG TCGCGCGAAA AAGCGTAACA AGATGGTGTC GTTCATTTCT
CTCTCTTCCA CTATTGGTAT TGCGGTTGGT GTTGCGGTGA TCATTATAGG TCTATCCGCT
ATGAACGGCT TTGAGCGTGA GCTGCAATCG CGAGTACTTT CTGTGATTCC GCACGGTGAG
TTAGAAGGGG TGAATGGACC GCTGCATAAC TACACCAAAA CCATGAACCA AGCCTTGAGT
CATGAACACG TCGTCGCTGC GGCGCCTTAT GTTCGATTTA CGGGATTGGC AGAAAAGGGC
AGTAAGCTTA AGGCGATTGA AGTGCGTGGT GTGGATCCTG CTTTTGAACA AGCGGTGTCG
AGCATGTCGG AGTTCATTGA TCCAAAAGCA TGGCAGAACT TCTATGCGGG CCAACAGCAA
GTCATTTTGG GGCGTGGTGT AGCGAATGAG CTTAACGTCG ATGTAGGTGA TTACATTACG
TTGATGATTC CGCAAACCGG AAGCACCAAT AAGGTTCAAG CGCCGAAACG AGTTCGCGTG
AAGGTGGCTG GATTCCTAAC ACTCAATGGT CAAATCGATC ACTCATTGGC TTTGGTGCCG
CTGAAAGATG CTCAGGCTTA TGCGCGCTTA GGTGATGGCG TCACGGGTAT TTCGCTCAAG
ACCGATGATG TACTTAACGC GCCTTCCATT GTGCGTGAAG TGGGTAATCT GATTGATGTG
TATGTTTACC TGAAAAGCTG GCAACAACAG TTTGGCTTCT TGTATCGTGA TATACAGTTA
GTTCGTACCA TTATGTACTT GGTGATGTTT TTGGTCATAG GTGTCGCGTG TTTCAACATT
GTGTCGACAC TGATGATGGC GGTGAAAGAT CGTGCTGCCG AGATTGCGAT TCTTCGTACT
ATGGGCGCAA AGGATGGTTT GATTAAGCGT ATCTTTGTGT GGCAAGGCGT GTTCTCGGGT
GTATTTGGCA GTCTTGCTGG CAGTGTGGTT GGTGTTCTTG TTGCGTTAAA TCTCACTCCA
ATCATCAAAG GGCTAGAAGC TTTGATTGGT CACCAATTTC TTTCGGGGGA TATCTACTTT
GTCGACTTCT TGCCATCGCA GTTACACTGG CCTGATGTCG CTTTAGTTTC CATTACAGCG
ATTGTTCTGA GCTTGCTAGC TACTTGGTAT CCCGCATCTC GTGCAGCGAA GCTTAACCCA
GCGGTGGTAT TGAGTTCAAA GTAG
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| Protein sequence | MIGGRFSRAK KRNKMVSFIS LSSTIGIAVG VAVIIIGLSA MNGFERELQS RVLSVIPHGE
LEGVNGPLHN YTKTMNQALS HEHVVAAAPY VRFTGLAEKG SKLKAIEVRG VDPAFEQAVS
SMSEFIDPKA WQNFYAGQQQ VILGRGVANE LNVDVGDYIT LMIPQTGSTN KVQAPKRVRV
KVAGFLTLNG QIDHSLALVP LKDAQAYARL GDGVTGISLK TDDVLNAPSI VREVGNLIDV
YVYLKSWQQQ FGFLYRDIQL VRTIMYLVMF LVIGVACFNI VSTLMMAVKD RAAEIAILRT
MGAKDGLIKR IFVWQGVFSG VFGSLAGSVV GVLVALNLTP IIKGLEALIG HQFLSGDIYF
VDFLPSQLHW PDVALVSITA IVLSLLATWY PASRAAKLNP AVVLSSK
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