| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01530 |
|---|
| Symbol | |
|---|
| ID | 5554870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1532612 |
|---|
| End bp | 1533736 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640907021 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444727 |
|---|
| Protein GI | 156973820 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCG CAGGTATCAC GATTGGTGTG ATGGCGTTGG TGACAGTACT GTCTGTGATG
AATGGCTTTG AAGCTCAGCT TAAAGAGCGC ATTTTAGGTG TGCTTCCTCA TGCTGTCGTT
TCTCAGCATG ATGGCAAAAC GCCAATGAGC GAGACGGCGC CCCAATTCAT TCAAAACATG
TCGACCATCG CTAAGCCAGA GCCGATTGTG CGTGGTGAAG CGGTGATCCA AAGTTCCGCG
CAGCTAACCG CTGGTTACTT GATTGGTATC GAGCCTAAAC TTGGCGATCC TATTTCTAAT
CACTTGATCG CAGGTCGTTT ATCTTCGCTA CAAGCGGGTG AATATAAGGT TTTCCTTGGT
CACAGCTTGG CGCGCTCTCT TAAAGTGTCG ATGGGTGACA AAGTCCGCTT AATGGTGACC
AATGCGACGC AATTTACCCC ATTAGGTCGA ATCCCAAGTC AACGTAACTT CACTGTGGCG
GGTATCTTTA ATACCGGCTC AGATGTGGAT GGTCAGCTTA TGATCGTCAA CATGACTGAC
GCTTCTAAAT TGATGCGTTT ACCGAAAGAT ACGGTATCCG GTTGGCGTGT GTTCTTCTCT
GACCCATTCA TGGTGACGGA ATTTGCAGAT AAGCCAATGC CGGAAGGTTG GCAATGGAGT
GACTGGCGTG AGCAGCGTGG TGAGCTTTTC CAAGCAGTAA AAATGGAAAA GAACATGATG
GGCTTGATGC TGGGTCTGAT TGTTGGCGTA GCAGCATTTA ATATTATTTC TGCGTTGATC
ATGGTGGTGA TGGAGAAGCA ATCGGAAGTC GCGATTCTCA AAACTCAAGG CATGAAGCAA
TCTCAAGTGA TGGCGATTTT CATGGTGCAG GGCGCGAGTA GTGGTGTGAT TGGTGCGATT
GTTGGTGGCG CGGTCGGCGT TGCTTTATCG CTCAATCTCA ATGCCATTCT GGAAGCGGCA
GGCGTTGCCT TGTTTAGCTT TGGTGGTCAC TTACCAATCG TGATTGATTC ATTCCAAATT
TTATTAGTGG TAGTGCTGGC GATTGCTCTG AGTCTAGCTG CAACTGTTTA CCCGTCTTAC
CGAGCATCTT CTGTTAAACC TGCTGAGGCA CTTCGCTATG AATAA
|
|---|
| Protein sequence | MSTAGITIGV MALVTVLSVM NGFEAQLKER ILGVLPHAVV SQHDGKTPMS ETAPQFIQNM
STIAKPEPIV RGEAVIQSSA QLTAGYLIGI EPKLGDPISN HLIAGRLSSL QAGEYKVFLG
HSLARSLKVS MGDKVRLMVT NATQFTPLGR IPSQRNFTVA GIFNTGSDVD GQLMIVNMTD
ASKLMRLPKD TVSGWRVFFS DPFMVTEFAD KPMPEGWQWS DWREQRGELF QAVKMEKNMM
GLMLGLIVGV AAFNIISALI MVVMEKQSEV AILKTQGMKQ SQVMAIFMVQ GASSGVIGAI
VGGAVGVALS LNLNAILEAA GVALFSFGGH LPIVIDSFQI LLVVVLAIAL SLAATVYPSY
RASSVKPAEA LRYE
|
|---|
| |