Gene VIBHAR_01522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01522 
Symbol 
ID5553344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1522775 
End bp1523362 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID640907013 
Producthypothetical protein 
Protein accessionYP_001444719 
Protein GI156973812 
COG category[R] General function prediction only 
COG ID[COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) 
TIGRFAM ID[TIGR02722] uncharacterized proteobacterial lipoprotein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GTATTGCTCT TTTAGGTCTT GCCGTCATTC TGGGTGGTTG TTCAAACAAA 
GTCTCTTACG GTGATGCGCA AGCGACTGAA ACCACAACGA TCGATTTCGG TTCGACGGAT 
CTACAAAAAA TTGCTGGCGA AATGGTCGAT AGCATGATGA TGTCAGGTTC AGTGGCAGCA 
ATTACTCGTG ACCAACGTCC TATCGTGTTT GTTGAGCGTA TCAAGAACAA GACAAGCGAA 
CATATTGATA CGGAATCAAT CACAGACACT ATCTCTACTA AGATGCTGAA CTCTGGTAAG 
TTCCGTTTCG TAGATATGGA CCGCGTTGAG TCGGTTCGTG AGCAACTTAA CTTCCAAAAC 
ACTGACGAGC TAGTGAACCA AAGCACAGCA ATCCAATTTG GTAAAATGGT CGGTGCGCAA 
TACATGCTTT ACGGAAACCT TTCTAGCATC GTGAAAAATG CAGGTAGTGA CAAAGACGTT 
TACTACAAAA TGACCATGCG TCTAATGGAC CTTGAAACTG GTCTGATTGA GTGGGCGGAT 
GAGACAGAAA TCCGTAAAGA ACAATCTAAG AGCCTATTTG GCCTTTAA
 
Protein sequence
MKKSIALLGL AVILGGCSNK VSYGDAQATE TTTIDFGSTD LQKIAGEMVD SMMMSGSVAA 
ITRDQRPIVF VERIKNKTSE HIDTESITDT ISTKMLNSGK FRFVDMDRVE SVREQLNFQN 
TDELVNQSTA IQFGKMVGAQ YMLYGNLSSI VKNAGSDKDV YYKMTMRLMD LETGLIEWAD 
ETEIRKEQSK SLFGL