| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01445 |
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| Symbol | |
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| ID | 5556054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1460935 |
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| End bp | 1464048 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640906936 |
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| Product | hypothetical protein |
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| Protein accession | YP_001444643 |
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| Protein GI | 156973736 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACTTT CTGACGTTTC CGTAAAGCGC CCCGTTGCGG CGTTGGTATT GAGCATGCTG
CTGTGTGTAT TCGGCTTTGT GTCGTTTACC AAGCTTGCAG TACGTGAAAT GCCAGACATC
GAAAGTCCAG TTGTATCGAT CAGCACTCGT TACGAAGGCG CTTCTGCAAC CATCATTGAA
AGCCAAATTA CTTCAGTACT GGAAGACCAA CTTTCGGGTA TCAGTGGTAT TGATGAAATC
AGCTCCACTA CTCGAAACAG CATGTCGCGT ATCACCATCA CCTTTGAATT GGGTTATGAC
CTTAATACGG GCGTAAGTGA CGTTCGTGAT GCGGTAGCTC GTGCTCAGCG TTCATTACCG
GACGAAGCCG ACGACCCTGT AGTATTCAAG AACAACGGTT CGGGTGAAGC TTCCCTCTAT
ATTAACCTTA GCTCGTCTGA AATGGACCGA ACCCAGCTAA CAGACTACGC CGAACGCGTT
CTGATGGACC GTTTCAGTCT GATCTCTGGT GTAAGTTCTA TCGACTTGTC TGGTGGTCTT
TACAAAGTCA TGTATGTGAA GCTTAAACCA GACCTGATGG CGGGTCGCTC GGTTACAGCA
TCTGACATTA CAGCTGCTCT GCGAAGTGAA AACTTAGAAA GCCCGGGTGG TGAAGTTCGT
AATGACTCAA CTGTGATGTC GGTGCGAACC GCACGTACTT ACAATACACC AGAAGACTTC
CAATACCTTG TCGTGAAACG CGCAAGTGAT AACACACCTA TCTATCTAAA AGATGTGGCG
GATGTGTTCA TCGGCGCAGA AAACGAAAAC TCGACCTTTA AGAGTGATGG TGTGGTTAAC
ATCAGCTTAG GTGTTGTGCC TCAGTCTGAT GCAAACCCGC TAGAAGTGGC GCAGTCGGTA
CGCTCTGAAG TCGATAAGAT TCAGAAGTTC CTGCCTGATG GGACTCGTCT AGCGATCGAT
TATGACGCTA CCGTTTTTAT CGAGCGCTCA ATTGATGAGG TTTACAGCAC CCTCTTTATT
ACGGGTGGCT TGGTAATTCT GGTTCTGTAC ATCTTTATCG GTCAGGCGCG TGCGACCCTG
ATTCCGGCGG TGACGGTACC CGTTTCACTG ATTTCTTCGT TTATTGCGGC TTACTACTTT
GGTTTCTCTA TTAACTTGAT CACCTTGATG GCACTGATCC TGTCTATCGG CCTGGTTGTG
GACGATGCCA TCGTAGTCGT TGAGAACATC TTCCACCATA TTGAGCGTGG TGAATCACCA
TTACTGGCGG CTTATAAAGG TACGCGAGAA GTAGGCTTCG CGGTTATCGC AACCACGTTG
GTTCTTGTGA TGGTATTCCT ACCGATTTCC TTCATGGATG GTATGGTAGG CTTGCTGTTT
ACCGAGTTCT CTGTATTGCT GGCTATGTCG GTGATCTTCT CGTCACTGAT TGCCTTGACA
CTTACACCTG TTCTAGGCAG TCAGATCCTC AAAGCGAACG TGAAACCTAA CCGGTTTAAC
CAAGCGGTTG ATAAATTGTT TGCTAAGCTG GAAGCGGGAT ATCGTAAAGC GCTGCGCGGT
GCGTTGAAAG TTCGTTGGGC GGCACCTTTG GTTATCGTTG CGTGTATGGG CGGCAGCTAC
GGCTTGATGA ATCAAGTACC GACACAGTTA ACCCCACAAG AAGACCGTGG TGTCATCTTT
GCCTTCGTAC GTGGGGCGGA TGCAACGTCA TATAACCGTA TGTCGGCAAA CATGGACATC
GTAGAGGATC GTTTGATGCC GCTTTTAGGC CAGGGTTTCC TGAAATCATT CAGCATCCAA
ACGCCTGCGT TCGGTGGCCA AGCTGGTGAC CAAACGGGTT TCGTTATCAT GATCCTTGAA
GATTGGAACG AACGTGACGT CACTGCACAA GAAGCCTTGA ACCAAGTACG TAAGTCATTG
GCTGGCATTC CTGATGTTCG TGTTTTCCCA TTCATGCCGG GTTTCCGCGG TGGTTCGAGT
GAGCCAGTGC AGTTCGTGCT TGGCGGCTCG GATTACGATG AGCTTTTAGT CTGGGCGGAA
ATGCTTAAGA ACAAGGCCGA AGAATCACCA ATGATGGAAG GTGCGGAGAT CGATTACTCT
GAGAAAACAC CAGAACTATT AGTCTCGGTT GATAAGCGCC GAGCAGCTGA ACTTGGTGTG
AGTGTTCAAG ACATTTCTGA AACGCTAGAA ATTATGCTTG GTGGTAAGAG TGAAACCACT
TATGTCGACC GCGGTGAAGA GTATGATGTT TACCTACGCG GTGATGAAAA CAGCTTCAAC
AACGCGGCAG ATTTAAGCCA GATATACTTG CGAACCACGA GCGGTGAGCT GGTGACCTTG
GACACGGTAA CCAAGATTGA AGAAGTGGCG GCATCGATCC GTTTGTCTCA CTACAACAAG
CAAAAGTCGA TCACCATTAC TGCGAACTTG TCGGAAGGCT ACACTCTGGG TGAGGCATTG
GACTTCCTCG ATCAAGAAGC GATTGATAAC CTCCCGGGTG ATATTTCAGT GAGTTACTCT
GGTGAATCAA AAGACTTCAA AGAGAATCAA GCTAGCGTAG CGGTCGTATT CGCATTAGCA
CTGTTAGTAG CGTATTTAGT ACTGGCAGCG CAGTTCGAAA GCTTCGTTAA CCCTCTGGTG
GTAATGTTCA CTGTACCGAT GGGCGTATTT GGCGGCTTCC TCGGTTTGGT GGTGATGAGC
CAAGGGATGA ACATATACAG TCAGATAGGC ATGATCATGT TGATCGGTAT GGTAACCAAG
AACGGCATTT TGATCGTTGA GTTTGCTAAC CAGTTGCGTG ACCGCGGCAT TGAGTTTGAA
AAAGCGATCA CGGATGCGGC AGCACGTCGT CTACGCCCGA TCATGATGAC AGCATTTACT
ACTTTGGCTG GTGCGATTCC ACTGATTATG TCGACTGGTG CGGGTTATGA AAGCCGTGTG
GCTGTTGGTA CCGTTATCTT CTTCGGTATG GGTTTTGCGA CGTTAGTTAC CCTGTTCGTT
ATCCCTGCGA TGTACCGATT GATCTCAGCG AAGACGCGTT CACCTGGCCA TGTTGAAGCT
AAGCTGAATA AAGCGCTTAG CCACGATACA AAAGGGCGTA TCGCGCACCC TTAA
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| Protein sequence | MLLSDVSVKR PVAALVLSML LCVFGFVSFT KLAVREMPDI ESPVVSISTR YEGASATIIE
SQITSVLEDQ LSGISGIDEI SSTTRNSMSR ITITFELGYD LNTGVSDVRD AVARAQRSLP
DEADDPVVFK NNGSGEASLY INLSSSEMDR TQLTDYAERV LMDRFSLISG VSSIDLSGGL
YKVMYVKLKP DLMAGRSVTA SDITAALRSE NLESPGGEVR NDSTVMSVRT ARTYNTPEDF
QYLVVKRASD NTPIYLKDVA DVFIGAENEN STFKSDGVVN ISLGVVPQSD ANPLEVAQSV
RSEVDKIQKF LPDGTRLAID YDATVFIERS IDEVYSTLFI TGGLVILVLY IFIGQARATL
IPAVTVPVSL ISSFIAAYYF GFSINLITLM ALILSIGLVV DDAIVVVENI FHHIERGESP
LLAAYKGTRE VGFAVIATTL VLVMVFLPIS FMDGMVGLLF TEFSVLLAMS VIFSSLIALT
LTPVLGSQIL KANVKPNRFN QAVDKLFAKL EAGYRKALRG ALKVRWAAPL VIVACMGGSY
GLMNQVPTQL TPQEDRGVIF AFVRGADATS YNRMSANMDI VEDRLMPLLG QGFLKSFSIQ
TPAFGGQAGD QTGFVIMILE DWNERDVTAQ EALNQVRKSL AGIPDVRVFP FMPGFRGGSS
EPVQFVLGGS DYDELLVWAE MLKNKAEESP MMEGAEIDYS EKTPELLVSV DKRRAAELGV
SVQDISETLE IMLGGKSETT YVDRGEEYDV YLRGDENSFN NAADLSQIYL RTTSGELVTL
DTVTKIEEVA ASIRLSHYNK QKSITITANL SEGYTLGEAL DFLDQEAIDN LPGDISVSYS
GESKDFKENQ ASVAVVFALA LLVAYLVLAA QFESFVNPLV VMFTVPMGVF GGFLGLVVMS
QGMNIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGIEFE KAITDAAARR LRPIMMTAFT
TLAGAIPLIM STGAGYESRV AVGTVIFFGM GFATLVTLFV IPAMYRLISA KTRSPGHVEA
KLNKALSHDT KGRIAHP
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