Gene VIBHAR_01429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01429 
Symbol 
ID5553089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1447372 
End bp1449090 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content48% 
IMG OID640906920 
Product2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 
Protein accessionYP_001444631 
Protein GI156973724 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 
TIGRFAM ID[TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAG ATCAAGCTGT TTTAAATCGC ATTTGGTCTG AAACCATCCT GACAGAATTG 
AACCGCTTTG GTGTGAATCA CGTTTGTATT GCACCCGGTT CTCGCTCCAC ACCTTTAACG
GTCGAGGCGG CAGATAACCC AAATTTTACC ATTCACACGC ACTTTGATGA GCGTGGCTTG
GGCTTTATGG CTCTGGGACT TGCTAAAGCA AGTAAAGAAC CAGTGGCGCT GATTGTTACA
TCGGGTACAG CGGTGGCGAA CTTGTTACCT GCGATTGCAG AAGCAAAACT GACGGGTGAA
AAGCTGGTGG TGCTAACTGC AGACCGTCCG GTTGAACTGG TGGGTTGCGG TGCAAACCAA
GCTATTAATC AGTTAGGCAT CTTCGCCGAA CATGTGTCAG ACAGTTTAAA TCTGCCGAGC
CCAACACTAT CAACACCTCT AAATTGGCTA CTGACTTCTG TCGATGAGGT GATGTTTACG
CAACGCCTAA GAGGCAGTGC GGTACACATT AACTGTGCGT TTCCAGAGCC TTTGTACTCC
AACACAGACA AGAGTACCTA TCAGGGTTAC CTTGATACCG TTGCCGGTTG GAGAGACAGC
AAAGTCACAT ATTGCCAACG CTTCAATCCA AAAACCAGCA GTGCAATACC AAGCTGTGGT
GACAACAAAG GCTTGGTAGT CATCGGCAGC TTGCCTTTGA TTCAAGCGCA AGCGGCACGT
ACATTTGCTG AGCAGATGGG ATGGCCAGTA CTGGCTGACC CACAAAGTGG TGTGAGCTCA
GATTGGGCAC ATTTCGATTT ATGGCTGCAA AATCCAAGAA TGGCGAGTCA GCTTGATGAC
TGTGATTTGA TTGTTCAGTT TGGCAGCCGA ATCATTTCTA AACGTTTTAA CCATTGGCTA
GAGAAGCATG TATCACGCAA CCAGCAGGGT GGTGATACAC AATATTGGTT TGTCTCTCCT
CGGTTAGACC GTGACAACCA GAGCCATTTA CCTCAATGGC ACTGGGCTGA GCAACCTAGC
GCTTGGGTAG AACGCACGTC GGGTTTCTCA TCAGAACACG CTGGCTGGGC AGATAAGTTG
GCAGCGGACA TCAAGCAGGT CACGCAGCAT GCCAAAGGGC TGTTTATTTC GGATCCTAAG
AGTGAGTTAA GTGAAATTGC ATTGGCGATT GATGTTGCCG AGCGCGCTCA GGGTGTGGAT
CTGTTTGTCG GCAATAGTTT GTTTGTTCGT TTAATCGACA TGTTCGGTAA GCTTGATAAC
ACAGAGGTTT TCACTAACCG TGGAGCGTCT GGCATTGATG GCCTGTTTGC TACTGCAAGT
GGTGTACAAC GCGCGCGGAA TAATCCGATG TTGATGTTTA TTGGCGACAC TTCTGCGTTA
TATGGCTTGA ACTCGTTGGC ACTGTTTACG CACAGTGAGC TCCCTTCGGT CTTGGTGATC
GCCAATAATG ATGGCGGTGC GATTTTTGAT TTGTTGCCAG TGCCGCAGGA ACATCGTGAG
TCGTTCTACC AAATGCCTCA TGGTTACGAG TTTGAGCACG CTGCGAAACA GTTCGGTTTG
CAGTATCGGA AGCCAAGCTC GTTAGCGGAA TACCAATCCT TGGTTTCCGA ACATTTTGCT
TCAGGGCAGG GCGCATTGGT GGTCGAAGTG CAAACGCCAT CGAACCAAGC TGTCGAGCAT
TTAAAATCCT TCGATAAGAA TTTGCATGCT CTATTCTGA
 
Protein sequence
MSVDQAVLNR IWSETILTEL NRFGVNHVCI APGSRSTPLT VEAADNPNFT IHTHFDERGL 
GFMALGLAKA SKEPVALIVT SGTAVANLLP AIAEAKLTGE KLVVLTADRP VELVGCGANQ
AINQLGIFAE HVSDSLNLPS PTLSTPLNWL LTSVDEVMFT QRLRGSAVHI NCAFPEPLYS
NTDKSTYQGY LDTVAGWRDS KVTYCQRFNP KTSSAIPSCG DNKGLVVIGS LPLIQAQAAR
TFAEQMGWPV LADPQSGVSS DWAHFDLWLQ NPRMASQLDD CDLIVQFGSR IISKRFNHWL
EKHVSRNQQG GDTQYWFVSP RLDRDNQSHL PQWHWAEQPS AWVERTSGFS SEHAGWADKL
AADIKQVTQH AKGLFISDPK SELSEIALAI DVAERAQGVD LFVGNSLFVR LIDMFGKLDN
TEVFTNRGAS GIDGLFATAS GVQRARNNPM LMFIGDTSAL YGLNSLALFT HSELPSVLVI
ANNDGGAIFD LLPVPQEHRE SFYQMPHGYE FEHAAKQFGL QYRKPSSLAE YQSLVSEHFA
SGQGALVVEV QTPSNQAVEH LKSFDKNLHA LF