| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01416 |
|---|
| Symbol | tig |
|---|
| ID | 5556466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1432447 |
|---|
| End bp | 1433754 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640906907 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001444618 |
|---|
| Protein GI | 156973711 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTA CTGTTGAAAC GCTAGAGGGC CTAGAGCGCC GTCTAAACAT TACTGTTCCA
GCTGCAAACA TCGAAGATGC TGTAACAGCT GAACTACGCA ACATCGCTAA AAACCGTCGT
TTCGATGGTT TCCGTAAAGG TAAAGTGCCT CTAAAAATGG TTGCTAAGAT GTACGGTAAA
GCAGTACGTC AAGACGTTCT TGGTGAAGTT ATGCAACGCC ACTTCATCGA AGCGATCGTA
AAAGAGAAAA TCAACCCAGC TGGCGCACCA ACGTTCGCTC CAGTTGAAAA CAACGAAGGC
GCAGATCTAG TATTCACTGC AACTTTCGAA GTTTACCCAG AAGTTGAGCT AAAAGGCCTA
GACAGCATCA CTGTTGAAAA ACCAACAACT GAAGTTAACG ATTCAGACGT AGAAGAGATG
ATCGAAACTC TACGTAAGCA ACAAGCTACT TGGGCTGAAG TTGAAGAAGC TGCAGAAGCT
GGTAAGCGCG TAAGCATCGA CTTCGTTGGT TCTATCGACG GTGAAGAGTT CGAAGGCGGT
AAAGCTGAGA ACTTCCCACT AGAAATGGGC GCAGGTCGCA TGATCCCAGG TTTCGAAGAC
GGTATCGAAG GCAAAACTAA AGGTATGGAA TTCGAAATCG ACGTAAACTT CCCAGAAGAT
TACCACGCTG AAAACCTAAA AGGTAAAGCG GCTAAGTTCG CAATCAAAGT GAACAAAGTT
GAAGCTCGTG AACTACCAGA ACTAAACGAC GAATTCGTTT CTAAGTTCGG TGTTGCTGAA
GGTGGCGTTG AAGCACTTAA AGCTGAAGTT CGTAAGAACA TGGAGCGTGA ACTTAAGCAA
GCTGTTAAGA ACCGCATCAA AGAGCAAGCT ATCGACGGTC TAGTTGAGCA AAACGAAATC
GACGTACCAG CTGCACTTAT CGACCAAGAA ATCCAAGTTC TACGTCAACA AGCTGCACAA
CGTTTCGGTG GTAACCCAGA AGCAGCTGCA CAGCTTCCAC GTGAACTATT CGAAGAGCAA
GCTAAACGTC GCGTAGTTGT AGGTCTTCTA CTAGGCGAAG TAATCAAGTC TGAAGAGCTA
AAAGCTGACG ACGAGAAAGT GAAAGCGCTA ATCGAAGAAA TGGCAACTGC TTACGAAGAT
CCATCAGAAG TTATTGCTTA CTACGAGCAA AACGAGCAAA TGATGAACAA CATGCGTAAC
GTTGCTCTAG AAGAGCAAGC TATCGACGCG ATCATCGCTA AAGCACAGGT TTCTGAGAAA
GAAGTAAGCT TCAACGAGCT ACTTAACCAA CAACAACCTG CTGCTTAA
|
|---|
| Protein sequence | MQVTVETLEG LERRLNITVP AANIEDAVTA ELRNIAKNRR FDGFRKGKVP LKMVAKMYGK
AVRQDVLGEV MQRHFIEAIV KEKINPAGAP TFAPVENNEG ADLVFTATFE VYPEVELKGL
DSITVEKPTT EVNDSDVEEM IETLRKQQAT WAEVEEAAEA GKRVSIDFVG SIDGEEFEGG
KAENFPLEMG AGRMIPGFED GIEGKTKGME FEIDVNFPED YHAENLKGKA AKFAIKVNKV
EARELPELND EFVSKFGVAE GGVEALKAEV RKNMERELKQ AVKNRIKEQA IDGLVEQNEI
DVPAALIDQE IQVLRQQAAQ RFGGNPEAAA QLPRELFEEQ AKRRVVVGLL LGEVIKSEEL
KADDEKVKAL IEEMATAYED PSEVIAYYEQ NEQMMNNMRN VALEEQAIDA IIAKAQVSEK
EVSFNELLNQ QQPAA
|
|---|
| |