| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01396 |
|---|
| Symbol | |
|---|
| ID | 5555692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 1409069 |
|---|
| End bp | 1409890 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640906888 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444599 |
|---|
| Protein GI | 156973692 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATACTTG TTGCACAAAA GGAGAAAGGA ATGAGTGAAA ACCGCTCAGA ATTCAACGGC
AAACTGTGTT TAGTGACCGG CGCAGGACAA GGGATTGGCC TAGCATGTGC CAAAAGCTTA
TTGGCACAAG GAGCACGAGT GATTGCCTGC GATGTCACTC AATTAGCACT CGATGTCTTC
CAGCAGTCGC TACCAAAATG CCAGCAATCG AATACGCTGC TTATCCCTTT TGATTTGGCA
GATTCAAATG CAATTCAAAC CGCTTGCCAC AACCTAGAGC AAGACCAACT TATCCCTGAT
TACATCGTCA CTTGTGCTGG CACTTTGCAA CTCGAATCAG TTTTAGATTT GCCACTGGAA
GCACTGACTA AAACCTTGGA TGTGAACTTA AAAGGCACCA TGCTGCTCAC ACAACAACTG
GCTAAAATTC TGGTCAAACA CAGCAAGCAA GGCGCGATTG TGGCCGTCGG TTCCAACGCC
GCAGACACAC CACGCGTCAA GATGTCCGCT TACTGCACAT CCAAAGCAGG CCTACACATG
TGGATGCAAT GTTTGGGGTT AGAACTGGCA GAGCATGGCA TTCGTTGCAA CATCGTTAGC
CCCGGTTCAA CCCGTACCCC AATGCAAGAG CAGATGTGGA ATGAAGCTTA TGGCGAGCGA
GAAACAATTC AAGGCAACTT GGCCTCCCAT CGCATGGGCA TTCCGTTAAA CAAGATTGCC
GAGACCAAGG ACATCACCAA CGCGATTGAG TTTTTGCTCA GTGATAAATC AGGTCATATC
ACCATGCATG ATTTGAGAGT GGATGGCGGA GCGACCTTCT GA
|
|---|
| Protein sequence | MILVAQKEKG MSENRSEFNG KLCLVTGAGQ GIGLACAKSL LAQGARVIAC DVTQLALDVF
QQSLPKCQQS NTLLIPFDLA DSNAIQTACH NLEQDQLIPD YIVTCAGTLQ LESVLDLPLE
ALTKTLDVNL KGTMLLTQQL AKILVKHSKQ GAIVAVGSNA ADTPRVKMSA YCTSKAGLHM
WMQCLGLELA EHGIRCNIVS PGSTRTPMQE QMWNEAYGER ETIQGNLASH RMGIPLNKIA
ETKDITNAIE FLLSDKSGHI TMHDLRVDGG ATF
|
|---|
| |