Gene VIBHAR_01388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01388 
Symbol 
ID5553481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1400842 
End bp1401813 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID640906880 
Productmembrane-bound lytic murein transglycosylase B 
Protein accessionYP_001444592 
Protein GI156973685 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TACTGGCAGC AATGCTCAGC GTTGGTATGT GCACTTCAGC CTTTGCAAGT 
AGCGATGGCT TTGATGAATA CCTAAACAAA TTGCGTGCAG AAGCGCGTGA TAAAGGCATT 
TCCGAACAGG TGATTAGTGC CGCTTTTGCT GATGTGGAAT ACAAACCACG TGCAGTCAAA 
GCTGACCGTA ACCAACCTGA GAAGAAACTG ACGTTAGATG AATATATTCC GCGCGCGGTA 
CCTGAGTGGA AGGTCAAGCA AGCGAAGCAG CTGTATAAAG AGCACTACGC TGAGCTAAAA 
CGCATTGGCG ATGAGTTTGG CGTGCAGCCG CGATTTATCG TTGCACTTTG GGGCGTAGAA 
AGTAACTTCG GTAAGTTCAC TGGTAACTTC CGTGTGATCG ACGCTTTGTC GACCATGGCG 
TTTGAAGGTC GTCGTGAAGA GTTCTTCCGT AAAGAAACCA TGGCGGCGCT ACAAATCCTA 
GATGAAGGTC ATATCGAGCT AGAGAACTTC AAAGGTTCTT GGGCTGGTGC GATGGGTCAA 
TGTCAGTTTA TGCCAAGCTC ATTCCTACGC TTTGCCGCGG ATGGTAATGG CGACGGCAAG 
AAAGACATCT GGCAATCAGA AGCGGACGTG TTTGCTTCTA CTGCGAACTA CCTAAGTAAA 
TCTGGCTGGG ATGATAAGTT CACTTGGGGT CGTCAGGTTA AAGTGCCACA CGGCATCGAC 
CATAACCTGC AAGGTCGCGA AGCGGAAAAA GGTAAGTATC TGCAAGAGTG GAGCAAGCTT 
GGCATCACCA AATACGATGG CAGCCCACTT CCTAAGTTGG ACGAAGACAT CAAGGCTTGG 
TTGATCATGC CAGACGATGA GAACGGTCGT ACTTACTTGG TGTACAACAA CTACAATGTG 
TTGATGAAGT GGAACCGCTC TTACTACTTC GCACTGGCGG TAAGTCACTT AGCTGACCGC 
ATCACATTCT AG
 
Protein sequence
MKKILAAMLS VGMCTSAFAS SDGFDEYLNK LRAEARDKGI SEQVISAAFA DVEYKPRAVK 
ADRNQPEKKL TLDEYIPRAV PEWKVKQAKQ LYKEHYAELK RIGDEFGVQP RFIVALWGVE 
SNFGKFTGNF RVIDALSTMA FEGRREEFFR KETMAALQIL DEGHIELENF KGSWAGAMGQ 
CQFMPSSFLR FAADGNGDGK KDIWQSEADV FASTANYLSK SGWDDKFTWG RQVKVPHGID 
HNLQGREAEK GKYLQEWSKL GITKYDGSPL PKLDEDIKAW LIMPDDENGR TYLVYNNYNV 
LMKWNRSYYF ALAVSHLADR ITF