Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01379 |
Symbol | |
ID | 5554983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1392380 |
End bp | 1394071 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640906871 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001444583 |
Protein GI | 229220839 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAAAC CATGGCTTTC ACGTTATCCA AGTGACGTAC CTGAAACCAT CAATCCAGAG CAATATGAGT CTTTGGTAGA AATGTTCGAG CAGTCTGTTC AAAAATACGC AGACCAACCG GCATTCATGA ACATGGGCTC GGTCATGACC TTCCGCAAAT TGGAAGAGCG TAGCCGCGCA TTCGCCGCAT ACCTACAAAA CGAACTTAAG CTGAAGAAGG GTGACCGCGT TGCTCTTATG ATGCCAAACC TGCTTCAATA CCCTGTCGCG CTATTCGGTA TTTTGCGTGC GGGCTGTATC GCTGTGAACG TGAACCCACT TTACACTCCT CGTGAGCTTG AGCATCAGCT AAACGATGCT GGCGCAACGG CGATCGTTAT CGTTTCTAAC TTCGCGAACA CGCTAGAGCA AATCGTAGAA AACACGCCAG TGAAACACGT GGTTCTGACC AGTCTTGGTC AAATGTTGCC ACGTGCAAAA GGTACACTTG TTGACTTCGT GGTTAAGTAC GTGAAGGGCA TGGTGCCTAA GTACGATCTA CCGGGTGCAA TCTCAATGCG TAAAGCGCTG CACAAAGGTC GTCGTCTTCA ATACGTGAAG CCATTTATGT CTGGTGATGA TATTGCATTC CTACAGTACA CTGGTGGTAC AACGGGCGTA GCGAAGGGCG CAATCCTGAC GCACCGCAAC ATGATCGCTA ACGTAATGCA GGCGAAAGGC GCTTATGGTC CAGTTTTGGC ACCAGGACGC GAGCTTGTTG TTACGGCACT GCCGCTTTAC CACGTATTCG CGCTGACGGT GAACTGTCTA CTGTTCGTTG AAATGGGTGG TAACAACCTG CTTATTACTA ACCCGCGTGA TATTCCGGGC TTTGTGAAAG AACTGCAAAA ATACCAGTTC ACTGCGATTA CCGGTGTAAA CACGCTATTT AACGCGCTAG TGAACAACGA AGATTTCCAT GAGCTAGATT TCAGCAACCT TCGCCTAGCA GTAGGTGGTG GTATGGCCGT ACAACGTGCT GTCGCTGAAA AATGGCAAAA GACCACAGGC TGTTACCTAC TAGAAGGTTA TGGTCTAACA GAATGTTCTC CATTGGTGGC GGCTTACCCG CACGACCTAG TGGAATACAA CGGTTCTATC GGTCTGCCTG TACCATCAAC AGAAGTACGT ATTGTTGATG AAGAAGGTAA CGCACTAGCA AATACAGAGA CAGGCGAGCT TCAAGTTCGC GGCCCTCAAG TGATGCAAGG TTACTGGCAG CGCCCAGAAG CGACCAAAGA AGTGATCAAC GAAGACGGTT GGCTATCGAC GGGTGACATC GTTAAGTTTG ATGATGAAGG CTTCCTGCAC ATCGTTGACC GTAAGAAAGA CATGATTCTT GTGTCTGGCT TCAACGTTTA CCCGAACGAA ATCGAAGACG TAGTTGCACT GCACGGTAAA GTGCTAGAAG TCGCGGCAAT CGGTCAGCCT CACGAAGTGT CTGGCGAGTT GGTGAAGATT TACGTTGTAA AACGCGATCC GAGCCTAACC AAAGACGAAG TGATTGCACA CTGTCGCCAA CACCTAACTG GCTACAAAGT GCCGAAGTTG GTTGAGTTCC GTGAAGATCT ACCTAAGACC AACGTAGGTA AGATCCTTCG TCGCGTACTG CGTGAAGAGA ACGACGCAGA GCTAGCGAAG AAGAGCGCAT AA
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Protein sequence | MDKPWLSRYP SDVPETINPE QYESLVEMFE QSVQKYADQP AFMNMGSVMT FRKLEERSRA FAAYLQNELK LKKGDRVALM MPNLLQYPVA LFGILRAGCI AVNVNPLYTP RELEHQLNDA GATAIVIVSN FANTLEQIVE NTPVKHVVLT SLGQMLPRAK GTLVDFVVKY VKGMVPKYDL PGAISMRKAL HKGRRLQYVK PFMSGDDIAF LQYTGGTTGV AKGAILTHRN MIANVMQAKG AYGPVLAPGR ELVVTALPLY HVFALTVNCL LFVEMGGNNL LITNPRDIPG FVKELQKYQF TAITGVNTLF NALVNNEDFH ELDFSNLRLA VGGGMAVQRA VAEKWQKTTG CYLLEGYGLT ECSPLVAAYP HDLVEYNGSI GLPVPSTEVR IVDEEGNALA NTETGELQVR GPQVMQGYWQ RPEATKEVIN EDGWLSTGDI VKFDDEGFLH IVDRKKDMIL VSGFNVYPNE IEDVVALHGK VLEVAAIGQP HEVSGELVKI YVVKRDPSLT KDEVIAHCRQ HLTGYKVPKL VEFREDLPKT NVGKILRRVL REENDAELAK KSA
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