Gene VIBHAR_01379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01379 
Symbol 
ID5554983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1392380 
End bp1394071 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content49% 
IMG OID640906871 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001444583 
Protein GI229220839 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAAC CATGGCTTTC ACGTTATCCA AGTGACGTAC CTGAAACCAT CAATCCAGAG 
CAATATGAGT CTTTGGTAGA AATGTTCGAG CAGTCTGTTC AAAAATACGC AGACCAACCG
GCATTCATGA ACATGGGCTC GGTCATGACC TTCCGCAAAT TGGAAGAGCG TAGCCGCGCA
TTCGCCGCAT ACCTACAAAA CGAACTTAAG CTGAAGAAGG GTGACCGCGT TGCTCTTATG
ATGCCAAACC TGCTTCAATA CCCTGTCGCG CTATTCGGTA TTTTGCGTGC GGGCTGTATC
GCTGTGAACG TGAACCCACT TTACACTCCT CGTGAGCTTG AGCATCAGCT AAACGATGCT
GGCGCAACGG CGATCGTTAT CGTTTCTAAC TTCGCGAACA CGCTAGAGCA AATCGTAGAA
AACACGCCAG TGAAACACGT GGTTCTGACC AGTCTTGGTC AAATGTTGCC ACGTGCAAAA
GGTACACTTG TTGACTTCGT GGTTAAGTAC GTGAAGGGCA TGGTGCCTAA GTACGATCTA
CCGGGTGCAA TCTCAATGCG TAAAGCGCTG CACAAAGGTC GTCGTCTTCA ATACGTGAAG
CCATTTATGT CTGGTGATGA TATTGCATTC CTACAGTACA CTGGTGGTAC AACGGGCGTA
GCGAAGGGCG CAATCCTGAC GCACCGCAAC ATGATCGCTA ACGTAATGCA GGCGAAAGGC
GCTTATGGTC CAGTTTTGGC ACCAGGACGC GAGCTTGTTG TTACGGCACT GCCGCTTTAC
CACGTATTCG CGCTGACGGT GAACTGTCTA CTGTTCGTTG AAATGGGTGG TAACAACCTG
CTTATTACTA ACCCGCGTGA TATTCCGGGC TTTGTGAAAG AACTGCAAAA ATACCAGTTC
ACTGCGATTA CCGGTGTAAA CACGCTATTT AACGCGCTAG TGAACAACGA AGATTTCCAT
GAGCTAGATT TCAGCAACCT TCGCCTAGCA GTAGGTGGTG GTATGGCCGT ACAACGTGCT
GTCGCTGAAA AATGGCAAAA GACCACAGGC TGTTACCTAC TAGAAGGTTA TGGTCTAACA
GAATGTTCTC CATTGGTGGC GGCTTACCCG CACGACCTAG TGGAATACAA CGGTTCTATC
GGTCTGCCTG TACCATCAAC AGAAGTACGT ATTGTTGATG AAGAAGGTAA CGCACTAGCA
AATACAGAGA CAGGCGAGCT TCAAGTTCGC GGCCCTCAAG TGATGCAAGG TTACTGGCAG
CGCCCAGAAG CGACCAAAGA AGTGATCAAC GAAGACGGTT GGCTATCGAC GGGTGACATC
GTTAAGTTTG ATGATGAAGG CTTCCTGCAC ATCGTTGACC GTAAGAAAGA CATGATTCTT
GTGTCTGGCT TCAACGTTTA CCCGAACGAA ATCGAAGACG TAGTTGCACT GCACGGTAAA
GTGCTAGAAG TCGCGGCAAT CGGTCAGCCT CACGAAGTGT CTGGCGAGTT GGTGAAGATT
TACGTTGTAA AACGCGATCC GAGCCTAACC AAAGACGAAG TGATTGCACA CTGTCGCCAA
CACCTAACTG GCTACAAAGT GCCGAAGTTG GTTGAGTTCC GTGAAGATCT ACCTAAGACC
AACGTAGGTA AGATCCTTCG TCGCGTACTG CGTGAAGAGA ACGACGCAGA GCTAGCGAAG
AAGAGCGCAT AA
 
Protein sequence
MDKPWLSRYP SDVPETINPE QYESLVEMFE QSVQKYADQP AFMNMGSVMT FRKLEERSRA 
FAAYLQNELK LKKGDRVALM MPNLLQYPVA LFGILRAGCI AVNVNPLYTP RELEHQLNDA
GATAIVIVSN FANTLEQIVE NTPVKHVVLT SLGQMLPRAK GTLVDFVVKY VKGMVPKYDL
PGAISMRKAL HKGRRLQYVK PFMSGDDIAF LQYTGGTTGV AKGAILTHRN MIANVMQAKG
AYGPVLAPGR ELVVTALPLY HVFALTVNCL LFVEMGGNNL LITNPRDIPG FVKELQKYQF
TAITGVNTLF NALVNNEDFH ELDFSNLRLA VGGGMAVQRA VAEKWQKTTG CYLLEGYGLT
ECSPLVAAYP HDLVEYNGSI GLPVPSTEVR IVDEEGNALA NTETGELQVR GPQVMQGYWQ
RPEATKEVIN EDGWLSTGDI VKFDDEGFLH IVDRKKDMIL VSGFNVYPNE IEDVVALHGK
VLEVAAIGQP HEVSGELVKI YVVKRDPSLT KDEVIAHCRQ HLTGYKVPKL VEFREDLPKT
NVGKILRRVL REENDAELAK KSA