Gene VIBHAR_01334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01334 
Symbol 
ID5554355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1343630 
End bp1344844 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID640906826 
Producttranscriptional regulator 
Protein accessionYP_001444538 
Protein GI156973631 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGCG GACAGATTGG TAATGTAGAT TTAGTAAAAC AGCTTAACAG CGCTGCGGTA 
TACAGGCTGA TTGACCAACA AGGTCCAATC TCCCGTATTC AAGTCGCGGA TGTTAGTCAG
CTCGCCCCAG CGAGTGTTAC CAAAATAACC CGCCAACTTT TAGAGCGCGG CTTAATTAAA
GAAGTCGCGC AACAAGCTTC TACCGGTGGT CGTCGAGCAA TCTCGTTGAC CACTGAAGTA
AAACCTTTCC ACTCTATCGC TGTTCGATTA GGTCGTGACT ACGTGCAATT CTGCTTGTAC
GACTTAGGCG GCACAGCATT GGCACAAGAT CAACACGAGC TTCATTACAG CAACCAAGCT
GATTTGATTG CTGGATTGAT TGATTTACTG AAAGACTTCG TTAATCGTTG CCAAGACAAG
ATCGACCAAC TTATCGCGAT CGGTATCACA CTGCCTGGTC TGGTGAACCC AACCACAGGT
GTTGTTGAGT ACATGCCGAA TACAGATATC GATAACCTCG CTCTAGGCGA AATCATTCGT
GAAAAATTTA ATACCGCGTG TTTTGTTGGT AACGACGTGC GTGGTATGGC ACTAGCTGAA
CACTACTTTG GCGCGAGCCA AGACTGCCAA GATTCGATTC TGGTCAGTGT TCACCGCGGT
ACTGGTGCAG GTATTATCGT GAACGGTCAG GTATTCCTTG GTTTCAACCG CAACGTCGGT
GAAATCGGTC ACATCCAAAT CGACCCACTT GGCGAGCAAT GCCAATGCGG TAACTTTGGC
TGTCTAGAAA CGGTTGCTGC CAACCCGGCC ATCGTACAAC GAGTGAAAAA GCTGATTGCA
CAAGGTTACG AATCGAGCCT GACTCAACTT GAACACATCA CCATTGATGA CGTTTGTACT
CATGGGATGA ATGGTGACGA GCTGGCGAAA CAAAGCCTAG TTCGCGTAGG TAACCAACTT
GGTAAAGCTA TCGCGATCAC GATTAACTTG TTTAACCCGC AAAAAATCGT TATTGCTGGT
GACATTACTG CCGCGGAAGA AATTGTGTTC CCAGCAATCC AGCGCAACGT AGAAAACCAA
TCTTTAAAGA CTTTCCATAA CGAACTTCCT ATTGTTGCCT CTCACATTGA TAAGCAACCA
ACAATGGGTG CATTTGCGAT GATCAAGCGC GCTATGTTGA ACGGAGTTTT GTTACAAAAG
TTACTAGAAG ACTAA
 
Protein sequence
MNGGQIGNVD LVKQLNSAAV YRLIDQQGPI SRIQVADVSQ LAPASVTKIT RQLLERGLIK 
EVAQQASTGG RRAISLTTEV KPFHSIAVRL GRDYVQFCLY DLGGTALAQD QHELHYSNQA
DLIAGLIDLL KDFVNRCQDK IDQLIAIGIT LPGLVNPTTG VVEYMPNTDI DNLALGEIIR
EKFNTACFVG NDVRGMALAE HYFGASQDCQ DSILVSVHRG TGAGIIVNGQ VFLGFNRNVG
EIGHIQIDPL GEQCQCGNFG CLETVAANPA IVQRVKKLIA QGYESSLTQL EHITIDDVCT
HGMNGDELAK QSLVRVGNQL GKAIAITINL FNPQKIVIAG DITAAEEIVF PAIQRNVENQ
SLKTFHNELP IVASHIDKQP TMGAFAMIKR AMLNGVLLQK LLED