Gene VIBHAR_01317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01317 
Symbol 
ID5554929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1325495 
End bp1326409 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID640906809 
Producthypothetical protein 
Protein accessionYP_001444521 
Protein GI156973614 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTG ACTCATTGAT CACCATCGGT ATTTTCGTTG CTCTAGCCGT TATCCTCCTC 
GCTTCTGCAG TAAAAACCGT TCCGCAAGGC AACAACTGGA CGGTCGAACG CTTTGGTCGT 
TACACCCATA CCCTCAAGCC AGGCCTTAAC CTCATCATTC CTTTTGTTGA CCGTGTCGGA 
CAAAAGGTCA ACATGATGGA GCGTGTACTC GACATTCCAG CACAAGAAGT GATTTCGAAA 
GACAACGCCA ATGTAGTCAT TGACGCGGTA GGGTTTGTTC AAGTCATCGA TGCCGCGAAA 
GCCGCTTATG AGGTTAACGA CCTAGAACAT GCGATTCGTA ACCTAACCCT CACTAACATT 
CGTACCGTAC TTGGCTCAAT GGAATTGGAC GAGATGCTTA GCCAACGTGA CATGATCAAT 
ACCAAACTGC TCTCTATTGT CGACCAAGCA ACCAACCCTT GGGGCGTAAA AGTCACTCGT 
ATTGAAATCA AAGATGTTCA ACCACCAGCG GACCTAACAG CAGCAATGAA CGCTCAGATG 
AAAGCAGAGC GTAACAAACG TGCGGAAATT CTCGAAGCTG AAGGGGTTCG CCAAGCTGAG 
ATCTTACGTG CCGAAGGCCA AAAACAGTCA GAGATTTTAA AAGCGGAAGG TGAAAAGCAA 
TCTGCTATCT TACACGCGGA GGCTCGTGAG CGCGCCGCAC AAGCAGAAGC AAAGGCAACT 
TACATGGTAT CGGAGGCAAT TGCTAAAGGT GACGTAAAAG CCGTGAACTA CTTTATAGCC 
CAAGGTTACA CCGAAGCATT GAAGAGTATT GGCCAAGCTG AAAACGGCAA GATCATCATG 
CTGCCAATCG AAGCCACTGG CCTAATGGGC TCTGTCGCGG GTATCGCAGA AATGTTCAAA 
CAAAGTAAAG ACTAA
 
Protein sequence
MPIDSLITIG IFVALAVILL ASAVKTVPQG NNWTVERFGR YTHTLKPGLN LIIPFVDRVG 
QKVNMMERVL DIPAQEVISK DNANVVIDAV GFVQVIDAAK AAYEVNDLEH AIRNLTLTNI 
RTVLGSMELD EMLSQRDMIN TKLLSIVDQA TNPWGVKVTR IEIKDVQPPA DLTAAMNAQM 
KAERNKRAEI LEAEGVRQAE ILRAEGQKQS EILKAEGEKQ SAILHAEARE RAAQAEAKAT 
YMVSEAIAKG DVKAVNYFIA QGYTEALKSI GQAENGKIIM LPIEATGLMG SVAGIAEMFK 
QSKD