Gene VIBHAR_01298 details

Gene Information

• Locus tag: VIBHAR_01298
• Symbol: flgL
• ID: 5554887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1304838
• End bp: 1306028
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640906790
• Product: flagellar hook-associated protein FlgL
• Protein accession: YP_001444502
• Protein GI: 156973595
• COG category: [N] Cell motility
• COG ID: [COG1344] Flagellin and related hook-associated proteins
• TIGRFAM ID: [TIGR02550] flagellar hook-associated protein 3

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAACGC GAATTTCTAG CTTCCATAAC TACCAGTCAG TGCAGAACGA CCTGCGCCGT 
CAGGAAAATA AGGTTCACCA TAATCAGGAG CAATTGGCTT CTGGTAAACA GTTGACCAAG 
CCGAGTGATG ATCCACTTGC GACGCACTAT ATTCAGAGTA TTGGTCAACA AGAAGAGCAG 
TTAAGGCAGT ACCTAGATGC GATTGTTCTG GTTCGTAACC GTCTAGAAAA CCAAGAAGTG 
GCTGTGGCTA ATGCAGAGCA ATTTGTTGAT GAGTCGAAGC GCCTTTCGAT GGAAATGATC 
AACGGTGCCT TCTCTCCAGA AGACCGTGCA GCGAAAAAGC GCGAACTGGA AGAAATTGCC 
AACAACTTCA TGGCGCTTGC GAACTCTCAA GATGAGTCGG GTAACTACGT TTTTGCTGGC 
ACGAAGCCAA AAACGCAGCC CTTTTTCCGT GATTCTGATG GCAGTGTGGT TTATACCGGT 
GACGATTATC AACGCAAGAT GAAGATCGCT AGCAACATTG AGATGGGTAT CAACTATCCG 
GGTAATAAAG TGTTCTCGGA GATCTCAAAT CCTTTTGGTG ATTTTGAACC GCAATACGGC 
CTACAAGAGG GCTCTGAGCT GTTGCTTGGA CAAGCGACCG ATGAATCTAA AAGTGACTCA 
AATTACAAAG TGACCTTTGT GGACATGAGT AATGGCAAGT TTGGTTACCA ACTGGAAAAA 
GATGGCGGCA TTGTTCAGGT CGATGACTAT TCGCCAATTG ACGGCATCCA ATATGAAGGC 
GTCAATATTC AGCTGAAAGG ACAAGTATCC GCAGGGGATA GCATCACGCT GGAACCACGC 
CAAACCTTCA GTATTTTTGA TGCATTCAAA GAAACCATGC AGTGGTCAGA GAGCTCAGTA 
TCTGACGCAT CGGCGACGGC AAAGCTGCAT CAAATGACGG AAGAATTCCA AGCGGCATTT 
GTTCACATGA ACAAAGTGAG AACCGATGTG GGTGCTAAGT TGAGCACGCT CGATATTCAA 
GAGCAAAACC ACGAAGATTT TAATTTGTCT CTGGCGAAAG CGAAGAGCAA TTTTGAGGAC 
TTGGATTACT CCAAGGCAGT GATTGAGTTC AGTGAGAATT CACGTGCATT GCAAGCCTCA 
CAACAGGCAT TTGGCAAAAC CAAAGACCTG ACGTTGTTTA ACTATATTTA A 

 

Protein sequence

MLTRISSFHN YQSVQNDLRR QENKVHHNQE QLASGKQLTK PSDDPLATHY IQSIGQQEEQ 
LRQYLDAIVL VRNRLENQEV AVANAEQFVD ESKRLSMEMI NGAFSPEDRA AKKRELEEIA 
NNFMALANSQ DESGNYVFAG TKPKTQPFFR DSDGSVVYTG DDYQRKMKIA SNIEMGINYP 
GNKVFSEISN PFGDFEPQYG LQEGSELLLG QATDESKSDS NYKVTFVDMS NGKFGYQLEK 
DGGIVQVDDY SPIDGIQYEG VNIQLKGQVS AGDSITLEPR QTFSIFDAFK ETMQWSESSV 
SDASATAKLH QMTEEFQAAF VHMNKVRTDV GAKLSTLDIQ EQNHEDFNLS LAKAKSNFED 
LDYSKAVIEF SENSRALQAS QQAFGKTKDL TLFNYI