Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01208 |
Symbol | glyA |
ID | 5555746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1226144 |
End bp | 1227394 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906700 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001444424 |
Protein GI | 156973517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGC GTGATATGAA CATCGCAGAT TACGATGCGG AACTGTTCGC AGCTATCCAG GAAGAAACAC TTCGCCAGGA AGAACACATT GAACTAATCG CTTCTGAAAA CTACACAAGT CCACGTGTAA TGGAAGCTCA AGGTTCTCAG CTAACGAACA AATACGCTGA AGGCTACCCA GGCAAGCGTT ACTACGGCGG TTGTGAGTAC GTAGATAAAG CTGAAGCACT GGCAATCGAT CGTGCATGCC AACTGTTCGG TTGTGAGTAC GCGAACGTAC AGCCTCACTC AGGTTCTCAA GCAAACAGCG CAGTTTACAT GGCGCTTCTA AACCCAGGCG ACACAGTTCT AGGTATGAGC CTAGCGCACG GTGGTCACCT AACTCACGGT TCTCCAGTAA ACTTTTCTGG TAAGCACTAC AACGTGATTC CTTACGGTAT CGACGAAGCA GGTAAAATCA ACTACGACGA GATGGAACAG CTAGCGCTTG AGCACAAGCC TAAGATGATC ATCGGTGGTT TCTCTGCTTA CTCACAAATC GTTGATTGGA AACGCATGCG TGAAATCGCA GACAAAGTTG ACGCTTACCT ATTCGTAGAC ATGGCACACG TTGCTGGTCT AATCGCAGCA GGTGAGTACC CAACACCAGT TCCACACGCT CACGTAGTAA CAACGACTAC GCACAAAACG CTAGCAGGTC CTCGTGGCGG TCTTATCCTT TCTAACGAAG GTGAAGAGCT TTACAAGAAG CTGAACTCAG CAGTATTCCC TGGCGGTCAA GGTGGTCCTC TAATGCACGT TATCGCTGGT AAAGCGGTAG CGTTCAAAGA AGCGATGGAG CCTGAATTCA AAGCTTACCA AGCTAACGTA GTGAAAAACG CGAAAGCAAT GGTTGGTCAA TTCCAAGAGC GTGGCTACAA GATCGTTTCT AACGGTACTG AGAACCACCT ATTCCTAGTT GACCTAATCG ACAAAGACAT CACTGGTAAA GATGCAGATG CAGCACTAGG TGCAGCAAAC ATCACAGTAA ACAAGAACTC TGTTCCAAAC GATCCACGCA GCCCATTCGT AACGTCTGGT ATCCGTGTTG GTACGCCAGC AATTACTCGT CGCGGCTTCA CTGAAGATGA CGCGAAAGAG CTAGCAAACT GGATGTGTGA CGTTCTAGAT AACATCGGCA ACGAAGAAGT TATCGAAGCG ACAAAACAGA AAGTTCTAGA AATCTGTAAG CGTCTACCAG TTTACGCGTA A
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Protein sequence | MLKRDMNIAD YDAELFAAIQ EETLRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP GKRYYGGCEY VDKAEALAID RACQLFGCEY ANVQPHSGSQ ANSAVYMALL NPGDTVLGMS LAHGGHLTHG SPVNFSGKHY NVIPYGIDEA GKINYDEMEQ LALEHKPKMI IGGFSAYSQI VDWKRMREIA DKVDAYLFVD MAHVAGLIAA GEYPTPVPHA HVVTTTTHKT LAGPRGGLIL SNEGEELYKK LNSAVFPGGQ GGPLMHVIAG KAVAFKEAME PEFKAYQANV VKNAKAMVGQ FQERGYKIVS NGTENHLFLV DLIDKDITGK DADAALGAAN ITVNKNSVPN DPRSPFVTSG IRVGTPAITR RGFTEDDAKE LANWMCDVLD NIGNEEVIEA TKQKVLEICK RLPVYA
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