Gene VIBHAR_01208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01208 
SymbolglyA 
ID5555746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1226144 
End bp1227394 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content48% 
IMG OID640906700 
Productserine hydroxymethyltransferase 
Protein accessionYP_001444424 
Protein GI156973517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGC GTGATATGAA CATCGCAGAT TACGATGCGG AACTGTTCGC AGCTATCCAG 
GAAGAAACAC TTCGCCAGGA AGAACACATT GAACTAATCG CTTCTGAAAA CTACACAAGT
CCACGTGTAA TGGAAGCTCA AGGTTCTCAG CTAACGAACA AATACGCTGA AGGCTACCCA
GGCAAGCGTT ACTACGGCGG TTGTGAGTAC GTAGATAAAG CTGAAGCACT GGCAATCGAT
CGTGCATGCC AACTGTTCGG TTGTGAGTAC GCGAACGTAC AGCCTCACTC AGGTTCTCAA
GCAAACAGCG CAGTTTACAT GGCGCTTCTA AACCCAGGCG ACACAGTTCT AGGTATGAGC
CTAGCGCACG GTGGTCACCT AACTCACGGT TCTCCAGTAA ACTTTTCTGG TAAGCACTAC
AACGTGATTC CTTACGGTAT CGACGAAGCA GGTAAAATCA ACTACGACGA GATGGAACAG
CTAGCGCTTG AGCACAAGCC TAAGATGATC ATCGGTGGTT TCTCTGCTTA CTCACAAATC
GTTGATTGGA AACGCATGCG TGAAATCGCA GACAAAGTTG ACGCTTACCT ATTCGTAGAC
ATGGCACACG TTGCTGGTCT AATCGCAGCA GGTGAGTACC CAACACCAGT TCCACACGCT
CACGTAGTAA CAACGACTAC GCACAAAACG CTAGCAGGTC CTCGTGGCGG TCTTATCCTT
TCTAACGAAG GTGAAGAGCT TTACAAGAAG CTGAACTCAG CAGTATTCCC TGGCGGTCAA
GGTGGTCCTC TAATGCACGT TATCGCTGGT AAAGCGGTAG CGTTCAAAGA AGCGATGGAG
CCTGAATTCA AAGCTTACCA AGCTAACGTA GTGAAAAACG CGAAAGCAAT GGTTGGTCAA
TTCCAAGAGC GTGGCTACAA GATCGTTTCT AACGGTACTG AGAACCACCT ATTCCTAGTT
GACCTAATCG ACAAAGACAT CACTGGTAAA GATGCAGATG CAGCACTAGG TGCAGCAAAC
ATCACAGTAA ACAAGAACTC TGTTCCAAAC GATCCACGCA GCCCATTCGT AACGTCTGGT
ATCCGTGTTG GTACGCCAGC AATTACTCGT CGCGGCTTCA CTGAAGATGA CGCGAAAGAG
CTAGCAAACT GGATGTGTGA CGTTCTAGAT AACATCGGCA ACGAAGAAGT TATCGAAGCG
ACAAAACAGA AAGTTCTAGA AATCTGTAAG CGTCTACCAG TTTACGCGTA A
 
Protein sequence
MLKRDMNIAD YDAELFAAIQ EETLRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDKAEALAID RACQLFGCEY ANVQPHSGSQ ANSAVYMALL NPGDTVLGMS
LAHGGHLTHG SPVNFSGKHY NVIPYGIDEA GKINYDEMEQ LALEHKPKMI IGGFSAYSQI
VDWKRMREIA DKVDAYLFVD MAHVAGLIAA GEYPTPVPHA HVVTTTTHKT LAGPRGGLIL
SNEGEELYKK LNSAVFPGGQ GGPLMHVIAG KAVAFKEAME PEFKAYQANV VKNAKAMVGQ
FQERGYKIVS NGTENHLFLV DLIDKDITGK DADAALGAAN ITVNKNSVPN DPRSPFVTSG
IRVGTPAITR RGFTEDDAKE LANWMCDVLD NIGNEEVIEA TKQKVLEICK RLPVYA