Gene VIBHAR_01087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01087 
Symbol 
ID5554584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1099790 
End bp1100335 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content40% 
IMG OID640906580 
Producthypothetical protein 
Protein accessionYP_001444306 
Protein GI156973399 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAT TACCCGAACG TAGTGGATGG CGTTCATTTC AGAATAATGA CTATACTCTT 
CATTGCGTAG CTAAAAACAC GAAAAAGATA AAAATGAGTA GATTAACGTT CCCAAATCAC 
ACAAAAAAGC TTTGCATTAT TTTTACAACT CTCGCTCTTA TGATTTCAGC AGGGTGCACT 
TCGACGTCAG CGGTCGGTAA CTCTAAAACA AAAGGTTATG CTCAGTCACA TGCTCTTAAT 
GGCAAAGCGT CTTGGTATGG AGATAAGTTC CATGGGAAAC TAACTGCAAG TGGTGAAACA 
TATGATCTAA ATGCCCTTAC CGCAGCGCAC AAAACTTTGC CTTTTGGCAC TATCGTGCGA 
GTAACCAACA CCGCCAACAA CAAGTCTGTT AATGTAAAAA TTAACGACCG AGGCCCTTTT 
GTACGAGGTC GAGTAATTGA TCTTTCACGC AAAGCTTTTG CAAAGATTGG CAACGTTGGA 
CAAGGTACAA TACCTGTAAG AATAGATATT GTTGATGACA GCAATACGTT TAGGTACAAA 
CATTAA
 
Protein sequence
MEALPERSGW RSFQNNDYTL HCVAKNTKKI KMSRLTFPNH TKKLCIIFTT LALMISAGCT 
STSAVGNSKT KGYAQSHALN GKASWYGDKF HGKLTASGET YDLNALTAAH KTLPFGTIVR 
VTNTANNKSV NVKINDRGPF VRGRVIDLSR KAFAKIGNVG QGTIPVRIDI VDDSNTFRYK 
H