Gene VIBHAR_01075 details

Gene Information

• Locus tag: VIBHAR_01075
• Symbol: xseA
• ID: 5555978
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 1083064
• End bp: 1084395
• Gene Length: 1332 bp
• Protein Length: 443 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640906569
• Product: exodeoxyribonuclease VII large subunit
• Protein accession: YP_001444295
• Protein GI: 156973388
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1570] Exonuclease VII, large subunit
• TIGRFAM ID: [TIGR00237] exodeoxyribonuclease VII, large subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCTCCC AGACCAATCA AAACATCTTC ACTGTTTCTC GCCTCAATGC CGAAGTGCGT 
CTGCTGCTCG AAAACGAAAT GGGGATCGTC TGGCTTGTCG GAGAGATATC CAACTTCTCA 
GCTCCCGTCT CTGGTCACTG GTACCTCACT CTTAAAGATT CTCGCGCTCA AGTTAAATGT 
GCCATGTTTC GTGGTAACAA TCGTCGCGTC ACTTTCAAAC CTGCTAACGG CAATCAAGTT 
CTAGTTAAAG CACGTCTGTC TCTGTATGAG CCGCGTGGTG ACTATCAATT GATCATTGAA 
AGCATGCAGC CAGAAGGCGA TGGTCGTCTG CAGCAAGAGT TCGAAGCCCT TAAGATGAAA 
CTGGCAGCAG AAGGTTTGTT TGCTCAAACT AATAAGCAGC CTTTACCTGA GCACCCAAAA 
CGCGTTGGTG TGATCACCTC GAAAACCGGT GCCGCACTGT ACGATATCCT AGATGTATTG 
AAACGCCGAG ATCCTTCTCT ACCCGTGGTG GTTTACCCAA CCATGGTGCA AGGTGAAGAA 
GCAGCCATTC AAATGGCGCA GGCAATCGGC CGTGCAAACA GTCGTGATGA ATGTGATGTA 
TTGATTGTTG GTCGTGGTGG CGGTTCGTTA GAGGACCTTT GGTGCTTTAA CAACGAAATC 
CTTGCTCGCA CTATTGCTGC AAGCCAAATT CCGATCATCA GTGCAGTTGG TCATGAAGTT 
GACGTAACAA TTGCTGACTT TGTTGCGGAC ATTCGAGCTC CGACGCCATC AGCGGCGGCT 
GAATTGGTAA GCCGCGATAA CAGCCACAAA GATCAAGCTT TGGTGACTCA TCAACATAAG 
CTAGCCAGTG CAATGCGTTA CTACCTAGCG CAACAAAAAC AGCAATCGGC TCAACTGATG 
CACCGTTTAG AGCGCCAGCA TCCAAGCTAT CAATTGCAGC GCCAGACACA ACAACTTGAT 
GAGCTGGAGA TGCGCCTGCA ACGCGCAATG CAACGATTTA TCACAACGCG CCAACAAGCC 
GTTGAGCGCA AACATCATCG CCTACAACTG AACTCACCAG TAAAGCGCTT GGCTGAGCAG 
AAGTCGAAGC TTGACCGAGT TGAGCAAAAA TTGCTGGATG CGATGGACCG TAAGTTACTG 
ACCATGCGCC ATCAACTGGC AATTGCGGCA GAGAAGCTAG ATACGGTAAG CCCACTGGCA 
ACGCTAAAAC GTGGTTACTC GATTACTCAA ACTGAGCAAG GTCAGGTTGT TACCCAGGCG 
AAAGATGTGA AAACGGGCGA CGTATTGGTC ACCCGCTTAT CTGATGGTGA GCTTCGCTCT 
ACCGTTAACT GA 

 

Protein sequence

MLSQTNQNIF TVSRLNAEVR LLLENEMGIV WLVGEISNFS APVSGHWYLT LKDSRAQVKC 
AMFRGNNRRV TFKPANGNQV LVKARLSLYE PRGDYQLIIE SMQPEGDGRL QQEFEALKMK 
LAAEGLFAQT NKQPLPEHPK RVGVITSKTG AALYDILDVL KRRDPSLPVV VYPTMVQGEE 
AAIQMAQAIG RANSRDECDV LIVGRGGGSL EDLWCFNNEI LARTIAASQI PIISAVGHEV 
DVTIADFVAD IRAPTPSAAA ELVSRDNSHK DQALVTHQHK LASAMRYYLA QQKQQSAQLM 
HRLERQHPSY QLQRQTQQLD ELEMRLQRAM QRFITTRQQA VERKHHRLQL NSPVKRLAEQ 
KSKLDRVEQK LLDAMDRKLL TMRHQLAIAA EKLDTVSPLA TLKRGYSITQ TEQGQVVTQA 
KDVKTGDVLV TRLSDGELRS TVN