Gene VIBHAR_01049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01049 
SymbolsecF 
ID5556486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1059149 
End bp1060096 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID640906543 
Productpreprotein translocase subunit SecF 
Protein accessionYP_001444269 
Protein GI156973362 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAA TTCTAAAAGC AGAAGGCACG ATCGGCTTTA TGCGTTGGTC GAAAGTCGCG 
TTCGTATTCT CTATCTGTAT GATCGCTGCT TCTATCTTCA CGCTATCAAC CAAATGGTTG
AACTGGGGTC TAGACTTTAC TGGTGGTACG CTCATCGAGG TAGGTTTTGA ACAACCTGCA
AACCTTCAAG AGATTCGTGC AGCGCTAGAT TCAAAAGGCT TCGGTGATGC GACAGTACAA
AACTTTGGTA GTGCTCGCGA TGTAATGGTT CGTCTTCGTC CTCGTGACGA TATGTCTGGT
GAAACACTAG GTAACCAAAT CATTGGTGCT ATCAAAGAAG GTACGGGTGA AAGCGTAGAA
ATGCGTCGTA TTGAATTCGT AGGTCCAAAC GTTGGTGATG AGCTAACAGA AGCGGGCGGT
CTAGCGATCC TTGTATCGCT GATCTGTATC CTGATCTACG TATCGATGCG ATTTGAATGG
CGTCTAGCGG CTGGTGCGGT AATGGCACTA GCACACGATA TCATCATCAC GCTGGGTGTG
TTCTCGTTCC TACAAATCGA AGTTGATCTT ACCATCGTAG CGGCGCTACT AACGGTAGTC
GGTTACTCGC TCAACGATAC CATCGTTGTA TTCGACCGGA TTCGTGAAAA CTTCCGTAAG
ATGCGTAAGG GCGAACCTTC AGACATCATG GATGCATCAA TCACTCAAAC ATTGAGCCGT
ACATTGATTA CGTCGGGTAC AACCTTGTTC GTAGTAATTG CCCTGTTCAT GCAAGGTGGT
GCGATGATTC ACGGCTTCGC AACCGCACTT CTACTTGGTA TCACGGTAGG TACTTACTCT
TCTATCTACG TAGCATCAGC ACTAGCGCTG AAACTGGGCA TCCAGAAAGA GCACTTGATG
CCACCTCAAG TAGAAAAAGA AGGTGCAGAG TTCGACGAGA TGCCATAA
 
Protein sequence
MFQILKAEGT IGFMRWSKVA FVFSICMIAA SIFTLSTKWL NWGLDFTGGT LIEVGFEQPA 
NLQEIRAALD SKGFGDATVQ NFGSARDVMV RLRPRDDMSG ETLGNQIIGA IKEGTGESVE
MRRIEFVGPN VGDELTEAGG LAILVSLICI LIYVSMRFEW RLAAGAVMAL AHDIIITLGV
FSFLQIEVDL TIVAALLTVV GYSLNDTIVV FDRIRENFRK MRKGEPSDIM DASITQTLSR
TLITSGTTLF VVIALFMQGG AMIHGFATAL LLGITVGTYS SIYVASALAL KLGIQKEHLM
PPQVEKEGAE FDEMP