Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01049 |
Symbol | secF |
ID | 5556486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1059149 |
End bp | 1060096 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906543 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001444269 |
Protein GI | 156973362 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAA TTCTAAAAGC AGAAGGCACG ATCGGCTTTA TGCGTTGGTC GAAAGTCGCG TTCGTATTCT CTATCTGTAT GATCGCTGCT TCTATCTTCA CGCTATCAAC CAAATGGTTG AACTGGGGTC TAGACTTTAC TGGTGGTACG CTCATCGAGG TAGGTTTTGA ACAACCTGCA AACCTTCAAG AGATTCGTGC AGCGCTAGAT TCAAAAGGCT TCGGTGATGC GACAGTACAA AACTTTGGTA GTGCTCGCGA TGTAATGGTT CGTCTTCGTC CTCGTGACGA TATGTCTGGT GAAACACTAG GTAACCAAAT CATTGGTGCT ATCAAAGAAG GTACGGGTGA AAGCGTAGAA ATGCGTCGTA TTGAATTCGT AGGTCCAAAC GTTGGTGATG AGCTAACAGA AGCGGGCGGT CTAGCGATCC TTGTATCGCT GATCTGTATC CTGATCTACG TATCGATGCG ATTTGAATGG CGTCTAGCGG CTGGTGCGGT AATGGCACTA GCACACGATA TCATCATCAC GCTGGGTGTG TTCTCGTTCC TACAAATCGA AGTTGATCTT ACCATCGTAG CGGCGCTACT AACGGTAGTC GGTTACTCGC TCAACGATAC CATCGTTGTA TTCGACCGGA TTCGTGAAAA CTTCCGTAAG ATGCGTAAGG GCGAACCTTC AGACATCATG GATGCATCAA TCACTCAAAC ATTGAGCCGT ACATTGATTA CGTCGGGTAC AACCTTGTTC GTAGTAATTG CCCTGTTCAT GCAAGGTGGT GCGATGATTC ACGGCTTCGC AACCGCACTT CTACTTGGTA TCACGGTAGG TACTTACTCT TCTATCTACG TAGCATCAGC ACTAGCGCTG AAACTGGGCA TCCAGAAAGA GCACTTGATG CCACCTCAAG TAGAAAAAGA AGGTGCAGAG TTCGACGAGA TGCCATAA
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Protein sequence | MFQILKAEGT IGFMRWSKVA FVFSICMIAA SIFTLSTKWL NWGLDFTGGT LIEVGFEQPA NLQEIRAALD SKGFGDATVQ NFGSARDVMV RLRPRDDMSG ETLGNQIIGA IKEGTGESVE MRRIEFVGPN VGDELTEAGG LAILVSLICI LIYVSMRFEW RLAAGAVMAL AHDIIITLGV FSFLQIEVDL TIVAALLTVV GYSLNDTIVV FDRIRENFRK MRKGEPSDIM DASITQTLSR TLITSGTTLF VVIALFMQGG AMIHGFATAL LLGITVGTYS SIYVASALAL KLGIQKEHLM PPQVEKEGAE FDEMP
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