Gene VIBHAR_01047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01047 
SymbolyajC 
ID5552985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1056927 
End bp1057256 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content43% 
IMG OID640906541 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001444267 
Protein GI156973360 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTT CTCAAGCTCA CGCAGCAGCA GAAGGCGCAC CAGCAGGCGG CGGTTTTGAA 
ATGCTAATCA TGCTAGGCAT GTTCGCGGTG ATCTTCTACT TCATGATCTA CCGCCCACAA
TCTAAGCGTG TTAAAGAACA CAAGAACCTA ATGTCTTCTA TGGGCAAAGG CGATGAAGTT
CTAACAAGCG GCGGCCTAGT GGGTAAAATC ACTAAGATTG CTGAAGACAA CGATTTCATT
TCAATTGAGC TAAACGCAAA CAATGAAGTT GTAATCAAGA AAGACTTCGT AACTGCAGTG
TTACCAAAAG GTACGCTGAA GTCTCTATAA
 
Protein sequence
MFISQAHAAA EGAPAGGGFE MLIMLGMFAV IFYFMIYRPQ SKRVKEHKNL MSSMGKGDEV 
LTSGGLVGKI TKIAEDNDFI SIELNANNEV VIKKDFVTAV LPKGTLKSL