Gene VIBHAR_00993 details

Gene Information

• Locus tag: VIBHAR_00993
• Symbol: tyrA
• ID: 5556396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1001383
• End bp: 1002510
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640906487
• Product: bifunctional chorismate mutase/prephenate dehydrogenase
• Protein accession: YP_001444219
• Protein GI: 156973312
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0287] Prephenate dehydrogenase; [COG1605] Chorismate mutase
• TIGRFAM ID: [TIGR01799] chorismate mutase domain of T-protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGTTG AACTTAACGC ATTACGCGAT CAAATTGATG CAGTCGACAA GCAAATGTTG 
GAGCTACTGG CACAACGTTT AGCACTAGTA GAGAAAGTGG GTGAAGTAAA AAGCGAACAC 
GGTTTGCCAA TTTACGCCCC AGATCGCGAG GCTGCCATGC TGGCGTCACG ACGAGCTGAA 
GCTGAAAAAA TGGGGATTCC TCCACAGCTG ATTGAAGACA TTCTTCGTCG AACCATGCGT 
GAGTCTTATG CCAGCGAGAA AGATTCCGGT TTTAAGTGTT TGAACCCAGA ATTGCGCTCA 
GTGGTTATTA TTGGTGGTAA TGGCCAGTTA GGTGGTCTGT TTGGCCGAAT GTTCAAACTC 
TCTGGTTACC AAGTAAAGGT GCTGGGCAGC AAAGATTGGG ATCACGCGGA TGACATCCTT 
AAAGGTGCGG GCCTGGTTGT GGTTACTGTG CCGATTCACC TAACAGAAGG TGTGATTGAA 
AAACTTGGTA ACCTGCCAAA AGACTGCATT CTGTGTGACC TGACTTCTAT CAAGTCTAAG 
CCGCTGCAAG CAATGTTGAA TGTGCACCAA GGTCCGGTTG TTGGTTTGCA CCCAATGTTT 
GGCCCAGATG TACCGAGCCT AGCGAAGCAG GTGATTGTCT ACTGTGACGG TCGTGGTAGC 
GATCAATACC AATGGCTATT GCAACAATTT GGAATTTGGG GCGCAAGCTT GTGCCAAATC 
GATGCGCAAG AGCACGACCA TGGCATGACT TTGATTCAGG CGCTGCGCCA CTTCACTTCT 
TTCGCTTACG GTATGCACTT AAGCAAAGAG AATCCGAACA TTGAACAACT ATTAAAGCTG 
AGCTCGCCGA TTTACCGTTT GGAGCTCGCG ATGGTAGGGC GTCTGTTTGG CCAAGACCCA 
AACCTCTACG GTGACATCAT TCTTTCATCA CAAGAAAACA TCGACATGAT TAAGCGTTTC 
CACCAACGCT TTGGTGAAGC GTTGTCTGTT TTAGACAGTA AAGATAAGGC TGAGTTTGTC 
GAAAGCTTCG AACAAGTGAG TGACTGGTTT GGTGATTACT CGCAGCAATT TATGAATGAG 
AGTCAGAACC TACTCAAACA AGCGAACGAC AACATCCACC GTGGATAA 

 

Protein sequence

MVVELNALRD QIDAVDKQML ELLAQRLALV EKVGEVKSEH GLPIYAPDRE AAMLASRRAE 
AEKMGIPPQL IEDILRRTMR ESYASEKDSG FKCLNPELRS VVIIGGNGQL GGLFGRMFKL 
SGYQVKVLGS KDWDHADDIL KGAGLVVVTV PIHLTEGVIE KLGNLPKDCI LCDLTSIKSK 
PLQAMLNVHQ GPVVGLHPMF GPDVPSLAKQ VIVYCDGRGS DQYQWLLQQF GIWGASLCQI 
DAQEHDHGMT LIQALRHFTS FAYGMHLSKE NPNIEQLLKL SSPIYRLELA MVGRLFGQDP 
NLYGDIILSS QENIDMIKRF HQRFGEALSV LDSKDKAEFV ESFEQVSDWF GDYSQQFMNE 
SQNLLKQAND NIHRG