Gene VIBHAR_00980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00980 
SymbolileS 
ID5556033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp986567 
End bp989395 
Gene Length2829 bp 
Protein Length942 aa 
Translation table11 
GC content48% 
IMG OID640906474 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001444206 
Protein GI156973299 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGT ATAAAGATAC CCTGAACTTA CCTGAAACAG GGTTTCCAAT GCGCGGCAAC 
CTGGCCAATC GTGAGCCAGA AATGCTTAAG CGTTGGTACA AAGAAGATCT TTACGGTGAA
ATCCGTAAAG CTAAGAAAGG CAAAAAGTCA TTCGTACTGC ACGATGGCCC TCCTTACGCG
AACGGTGACA TTCACATTGG TCACGCACTA AACAAGATTC TTAAAGACAT TATTATTAAA
TCCAAAACAC TTTCAGGTTT TGACGCACCT TACATCCCAG GCTGGGACTG CCACGGTCTA
CCTATCGAAT TGATGGTAGA GAAGAAAGTA GGCAAGCCAG GCCAAAAAGT GACGGCAGCT
GAGTTCCGCG AGAAATGTCG CGAGTACGCT GCAGGTCAAG TTGAAGGTCA AAAAGAGAGC
TTCAAGCGTC TTGGCATCAT GGGTGAGTGG GACAAGCCAT ACCGCACTAT GGACTTCGCA
ACTGAAGCGA ACATCATCCG TGCACTTGGT AAGATCGCAA GCAAAGGTCA CCTACTGAAA
GGTTTTAAAC CAGTTCACTG GTGTACAGAC TGTGGTTCAG CTCTTGCTGA AGCAGAAGTT
GAGTACAAAG ATAAAGTATC GCCATCTATC GACGTTCGCT TCAAAGCGGC TGACGAAGCG
GCACTGCTAT CTAAGTTTGA GCTAACTGAA GGTCACGAAG GCCAAGGTGA CATATCTATC
GTTATCTGGA CAACAACACC TTGGACACTG CCTGCAAACC GCGCAGTATG TCTACGTGAT
GATCTAGAGT ACGTGCTTAT CCAAACAGAA GGCGACAACG CTGAGCGTAT CATCGTTGCT
GCTGAGCTAG CGAAAGACGT AATGGACCGT GCAGGTATCG AGCACTTCCA CAACCTTGGC
TTTGCTAAAG GTGCGGACCT AGAGCTTTCT CAATTCCAAC ACCCATTCTA CGATTTCACT
GTACCGGCGA TCCTTGGTGA TCACGTTACA ACTGATTCAG GTACTGGTGT TGTTCACACT
GCACCTGGTC ACGGTCAAGA AGACTTCGCG GTTGGTAATA AATACAACCT AGAAGTAGCA
AACCCAGTTG GTTCAAACGG TGTTTACCTA CCAGACACTG AGCTATTTGC TGGTCAGCAC
GTATTTAAAG CGAACGATGC AGTAGTAGAA GTACTCAAAG AAAAAGGTGC ACTACTACAC
CACCACGCAT ACGAGCACAG CTACCCACAC TGTTGGCGTC ATAAGACTCC GATCATCTTC
CGCGCAACAC CACAATGGTT CGTATCTATG GACCAAGCTG GCCTACGTGC TAAAGCACTA
GAGTCAATCA AGAATGTTGA GTGGATGCCT GAGTGGGGTC AAAGCCGTAT CGAAGGTATG
ATCGAAGGTC GCCCTGAGTG GTGTATCTCT CGTCAACGTA CTTGGGGTGT GCCAATTGCT
CTGTTCGTTC ATAAAGAAAC AGCAGAACTT CATCCAAACA CGCTAGAGCT GATCGAGAAA
GTCGCTAAGC TGGTTGAAGA GAAAGGCATC CAAGCATGGT GGGATGTCGA TGCAGCTGAA
CTACTAGGTG CTGACGCTGA CCAATACGAA AAAGTACTAG ATACACTAGA CGTATGGTTC
GATTCAGGTG TTACACACTT CTCTGTTGTT GATGCTCGTG AAGAGTACAA CGGCAACAGC
GCAGACCTAT ACCTAGAGGG TTCTGACCAA CACCGCGGTT GGTTCCAGTC TTCTCTAATT
TCATCTATCG CGATGAAAGA CGAAGCGCCG TACAAACAAG TACTGACACA CGGTTTCGTG
GTTGATGGTC ACGGTCGTAA GATGTCGAAA TCTATCGGTA ACGTGGTTGC GCCAAAAGAC
GTAACTAACA AGCTAGGTGC TGACATTCTT CGTCTATGGG TTGCTTCAAC AGACTACACT
GGTGAAGTTG CGGTTTCTGA TGAAATCCTA AAACGCAGCG CAGATGCGTA CCGTCGTATC
CGTAACACAG CGCGTTTCTT CCTTGCTAAC CTAAGCGGCT TCAACCCTGA AACAGACATT
GTTCCTGTTG AAGAGATGGT TGCGCTAGAT CGCTGGGCGG TTGGTCGTGC ACTAGCAGCA
CAAGAAGAGA TTGTTAAAGC ATACGAAGAG TACAACACTC ACGGTGTGAC TCAGCGTCTA
ATGCAATTCT GTTCAATCGA AATGGGCTCT TTCTACCTAG ACGTAATTAA AGACCGTCAG
TACACAGCAA AACGTGGCGG CAACGCTCAA CGTAGCTGCC AGACAGCACT TTACTACATC
GTAGAAGCGC TAGTTCGTTG GATGGCGCCA ATCATGTCGT TCACTGCAGA TGAAATCTGG
AACGAAATGC CTGGTCAACG CGACAAGTTC GTATTCACTG GTGAGTGGTT CGATGGTCTA
TTCGGTCTTG CTGAAGGCGA AGAGCTGAAC AACGAATTCT GGACTGAGAT CCAAGCGGTT
CGTGGTGCAG TGAACAAACT TCTAGAAGAT GCGCGTAAAG AGAAAACTAT CGGTGGTGCA
CTACAAGCTG AAGTGACGCT ATTTGCTGAT GACGCTCTAG CGGCGAAAAT TAACAAACTA
GAAGATGAAC TGCGCTTTGT TCTACTAACA TCTGCAGCGA AAGTTAAGCC TCTAGGTGAG
AAGACTGATG CTGCACAAGC GACGGATATC GAAGGCTTAT TTGTTGAAGT AGCAGCAGCT
GAAGGCGAGA AGTGTGACCG TTGTTGGCAC CACACGCCAG ACGTAGGCAC AATCGAAGGT
CACGAGAAGA TCTGTGGTCG TTGTGTGTCT AACGTTGACG GCGAAGGTGA AGTACGTAAA
TTCGCGTAA
 
Protein sequence
MSEYKDTLNL PETGFPMRGN LANREPEMLK RWYKEDLYGE IRKAKKGKKS FVLHDGPPYA 
NGDIHIGHAL NKILKDIIIK SKTLSGFDAP YIPGWDCHGL PIELMVEKKV GKPGQKVTAA
EFREKCREYA AGQVEGQKES FKRLGIMGEW DKPYRTMDFA TEANIIRALG KIASKGHLLK
GFKPVHWCTD CGSALAEAEV EYKDKVSPSI DVRFKAADEA ALLSKFELTE GHEGQGDISI
VIWTTTPWTL PANRAVCLRD DLEYVLIQTE GDNAERIIVA AELAKDVMDR AGIEHFHNLG
FAKGADLELS QFQHPFYDFT VPAILGDHVT TDSGTGVVHT APGHGQEDFA VGNKYNLEVA
NPVGSNGVYL PDTELFAGQH VFKANDAVVE VLKEKGALLH HHAYEHSYPH CWRHKTPIIF
RATPQWFVSM DQAGLRAKAL ESIKNVEWMP EWGQSRIEGM IEGRPEWCIS RQRTWGVPIA
LFVHKETAEL HPNTLELIEK VAKLVEEKGI QAWWDVDAAE LLGADADQYE KVLDTLDVWF
DSGVTHFSVV DAREEYNGNS ADLYLEGSDQ HRGWFQSSLI SSIAMKDEAP YKQVLTHGFV
VDGHGRKMSK SIGNVVAPKD VTNKLGADIL RLWVASTDYT GEVAVSDEIL KRSADAYRRI
RNTARFFLAN LSGFNPETDI VPVEEMVALD RWAVGRALAA QEEIVKAYEE YNTHGVTQRL
MQFCSIEMGS FYLDVIKDRQ YTAKRGGNAQ RSCQTALYYI VEALVRWMAP IMSFTADEIW
NEMPGQRDKF VFTGEWFDGL FGLAEGEELN NEFWTEIQAV RGAVNKLLED ARKEKTIGGA
LQAEVTLFAD DALAAKINKL EDELRFVLLT SAAKVKPLGE KTDAAQATDI EGLFVEVAAA
EGEKCDRCWH HTPDVGTIEG HEKICGRCVS NVDGEGEVRK FA