Gene VIBHAR_00966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00966 
Symbol 
ID5553557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp971926 
End bp972606 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content49% 
IMG OID640906460 
ProductDNA mismatch repair protein 
Protein accessionYP_001444192 
Protein GI156973285 
COG category[L] Replication, recombination and repair 
COG ID[COG3066] DNA mismatch repair protein 
TIGRFAM ID[TIGR02248] DNA mismatch repair endonuclease MutH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG AACCACAATC CGAAGCTGAA CTGATGGAAC GCGCGCAAGA CATTGCTGGC 
TTAAGCTTTG CCGAGCTCGC TGAGGAAGCT GGCATGACCG TTCCTGAAAA CTTGAAGCGC
GATAAAGGTT GGGTCGGTCA ATTACTCGAA TGGCACCTGG GTGCACCAGC CGGCAGCAAG
CCTCAGCAAG ATTTCGCCAA ACTTGGGATC GAACTAAAGA GCATTCCAAT CGGGTATTCT
GGCAAACCTT TAGAGACTAC CTTTGTCTCT GTTGCCCCAC TGACTGGCGT GCAAGGTTTA
ACATGGGAAA CCAGCCATGT ACGCAATAAA CTATCCCGTG TGCTTTGGGT ACCAGTAGAA
GGTGAACGTG AGATTCCGTT GGCTGAGCGC CGTGTCGGCA GCCCGTTGAT TTGGTCGCCA
GATCAAGAAG AAGAGCAGAT TCTGAAAAAT GATTGGGAAG AATTGATGGA ATTGATCGTA
CTAGGTAAGT TTGATCAAAT TTCCGCCAGA CACGGCGAAG CACTGCACTT ACGTCCGAAA
GCTGCAAACG CGAAAGCTTT AACGGAAGCG TACAGTTCGA ACGGAAAACC GATCAAAACC
CTGCCTCGTG GTTTCTATCT CAGGACACAG TTTACTGAGC AGATCCTACT GAAGCATTAT
ATTAACGCCC AATCAGAGTG A
 
Protein sequence
MKPEPQSEAE LMERAQDIAG LSFAELAEEA GMTVPENLKR DKGWVGQLLE WHLGAPAGSK 
PQQDFAKLGI ELKSIPIGYS GKPLETTFVS VAPLTGVQGL TWETSHVRNK LSRVLWVPVE
GEREIPLAER RVGSPLIWSP DQEEEQILKN DWEELMELIV LGKFDQISAR HGEALHLRPK
AANAKALTEA YSSNGKPIKT LPRGFYLRTQ FTEQILLKHY INAQSE