| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00944 |
|---|
| Symbol | |
|---|
| ID | 5556304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 948577 |
|---|
| End bp | 949464 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640906438 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_001444170 |
|---|
| Protein GI | 156973263 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA TAAAAAACAC GTTTGGAAAC AAATTTATTG GTGCTCATGT CTCGGCTGCG
GGCGGTGTTG ACCAAGCGCC TCTTCGCGCT CGCGAAATTG GTGCGAATGC ATTTGCTTTG
TTTACCAAGA ACCAACGTCA GTGGGTTGCG AAGCCGCTTG AAGAGAAAAC CATTAGCGCA
TTCAAAGCGA ACTGCAAAAT GCTTGGCTTT GGCGCAGAGC ATATTCTTCC CCATGATTCT
TATCTGATTA ACTTAGGTGC GCCGGAAGAA GAAAAGCTGA ATAAATCCCG CGCGGCATTT
ATTGATGAGA TGGAGCGTTG TAATCAACTT GGGTTAACGC TGCTGAATTT CCATCCTGGC
AGTCATCTAA AGAAAGTGTC GGAACAAGAG TGCTTAGCGA CGATCGCCGA GTCGATCAAT
CTTGCGCACA AAGCGGTGCC CAATGTGATC GCTGTGATTG AGAACACAGC TGGTCAGGGG
ACAAACCTAG GTTGGAAGTT TGAGCACCTT GCTGAAATCA TCGATCAAGT GGAAAACAAA
GAGCGTGTTG GCGTATGTCT CGATACTTGC CACACGTTTA CTGCCGGCTA CGATCTGCGT
ACTAAAGAGG ATTGTGAGCA TACCTTTGCT GAATTCGATC GTGTTGTTGG GATGCACTAT
TTAAGAGCAA TGCATCTAAA TGATTCAAAA GTTGAATTCG CTAGCAAGGT TGACCGACAT
CATTCATTAG GTAAAGGCGA GATCGGTTGG AGTTGTTTTG AGTACATCGC TAAAGATCCG
CGCTTTGATG GTATACCTCT GATTTTAGAG ACAATTGATC CCGATATTTG GCAGCAAGAA
ATCAATACTT TGCGCAAATT CCATATCGAA GAGATCGCTA ATTCGTAA
|
|---|
| Protein sequence | MTNIKNTFGN KFIGAHVSAA GGVDQAPLRA REIGANAFAL FTKNQRQWVA KPLEEKTISA
FKANCKMLGF GAEHILPHDS YLINLGAPEE EKLNKSRAAF IDEMERCNQL GLTLLNFHPG
SHLKKVSEQE CLATIAESIN LAHKAVPNVI AVIENTAGQG TNLGWKFEHL AEIIDQVENK
ERVGVCLDTC HTFTAGYDLR TKEDCEHTFA EFDRVVGMHY LRAMHLNDSK VEFASKVDRH
HSLGKGEIGW SCFEYIAKDP RFDGIPLILE TIDPDIWQQE INTLRKFHIE EIANS
|
|---|
| |