| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00913 |
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| Symbol | carB |
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| ID | 5554251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 908546 |
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| End bp | 911779 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906407 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001444139 |
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| Protein GI | 156973232 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACTGACAT TCAAAGTATT CTTATTCTTG GTGCTGGTCC GATTGTTATC
GGTCAGGCAT GTGAGTTTGA CTACTCTGGC GCACAAGCGT GTAAAGCACT GCGTGAAGAG
GGTTACCGAG CTATCCTAGT AAACTCTAAC CCTGCAACCA TCATGACTGA CCCAGACATG
GCGGATGCAA CTTACATCGA GCCAATCCAA TGGGAAGTGG TTCGCAACAT CATCGCGAAA
GAAAAGCCGG ATGCAGTACT ACCAACAATG GGTGGTCAAA CTGCATTGAA CTGTGCACTA
GACCTAGAGA AGCACGGTGT TCTTGAAGAG TTCGGCGTTG AGATGATTGG TGCGACTGCT
GACGCAATCG ACAAAGCGGA AGACCGTTCT CGTTTCGATA AAGCGATGAA GTCTATCGGC
CTTGAGTGCC CACGTGCAGA TACTGCAAAA ACGATGGAAG AAGCTTACGC TGTACTCGAT
ATGGTTGGCT TCCCTTGTAT CATCCGTCCA TCATTTACTA TGGGTGGTAC TGGTGGCGGT
ATCGCATACA ACAAAGAAGA GTTCGAAGAA ATCTGTCGTC GTGGTTTGGA CCTATCTCCA
ACCAACGAAC TTCTTATCGA TGAATCTCTT ATCGGTTGGA AAGAGTACGA GATGGAAGTG
GTTCGTGACA AAGCGGACAA CTGTATCATC GTATGTGCGA TTGAAAACTT TGACCCAATG
GGCATCCACA CGGGTGACTC AATCACAGTG GCACCAGCGC AAACACTAAC AGACAAAGAA
TACCAGCTAA TGCGCAACGC ATCTCTAGCA GTATTGCGTG AGATTGGCGT TGAAACTGGT
GGTTCTAACG TACAGTTTGG TATCAACCCG AAAGATGGCC GCATGGTTAT CATCGAGATG
AACCCACGCG TATCTCGCTC TTCTGCTCTA GCATCGAAAG CAACAGGTTT CCCAATCGCT
AAGATTGCAG CGAAACTGGC AGTTGGCTTT ACGCTAGACG AGCTAATGAA CGACATCACT
GGCGGCGCTA CGCCAGCATC ATTCGAACCA ACAATCGACT ACGTAGTAAC AAAGATTCCT
CGCTTTAATT TCGAGAAATT TGCTGGTGCT AACGACCGTC TAACGACGCA AATGAAGTCA
GTTGGTGAGG TAATGGCAAT TGGTCGTAAC CAACAAGAGT CACTACAAAA AGCACTTCGC
GGTCTAGAAG TAGGCGCTAC TGGTTTTGAC GAGATGGTTG ACCTAGATGC GCCAGACGCA
CTGACGAAAA TCCGTCATGA GCTGAAAGAA GCAGGCGCAG AGCGTATTTG GTACATCGCG
GATGCATTCC GTGCAGGTAT GTCAGTAGAT GGCGTATTCA ACCTAACGCA AATCGACCGT
TGGTTCTTAG TTCAAATCGA AGACATCGTG AAGCTTGAGC AAGAGCTAAA AGCAAAAGGC
TTCGCTGGTC TAAACAAAGA AGAACTTAAC AAGCTGAAGC GCAAAGGTTT TGCTGATGCA
CGTCTATCTA AGATTCTAGG TGTTGCGGAA AGCGAAATCC GTCGTCTACG TGACCAGTAC
GACATCCACC CAGTGTACAA GCGCGTTGAT ACGTGTGCGG CTGAGTTCTC TTCTGATACG
GCTTACATGT ACTCATCTTA CGATGACGAG TGTGAAGCGA ACCCAACAGA CAAAGACAAG
ATCATGATCC TAGGCGGCGG TCCAAACCGT ATCGGTCAAG GTATCGAATT TGACTACTGT
TGTGTACACG CATCGCTAGC ACTGCGTGAA GATGGCTACG AAACTATCAT GGTTAACTGT
AACCCTGAGA CTGTTTCTAC GGACTACGAC ACGTCTGACC GTCTGTACTT CGAACCAGTA
ACACTGGAAG ACGTACTAGC AATCGCTCGT GTTGAGAAGC CAAAAGGCGT TATCGTTCAG
TACGGTGGTC AAACACCACT TAAACTGGCT CGCGCACTTG AAGCGGCTGG CGTGCCAATC
ATCGGTACTA GCCCAGATGC AATCGACCGT GCAGAAGACC GTGAGCGTTT CCAAGTTGCT
GTTGACCGTC TAGGTCTTCT ACAGCCAGAA AACGCGACAG TAACGACGAT GGAGCAAGCG
GTAGAGAAAT CTCGTGAAAT AGGTTACCCA CTGGTTGTAC GTCCTTCTTA CGTACTTGGT
GGTCGTGCGA TGGAAATCGT ATACGATGAG CAAGACCTAC GTCGCTACTT CAACGAAGCT
GTCAGCGTAT CAAACGAATC TCCAGTTCTA CTAGATAGCT TCCTAGACGA CGCAGTTGAA
GTCGATATCG ATGCTATCTG TGACGGTGAG CGTGTGGTTA TCGGCGGTAT CATGGAGCAC
ATCGAACAAG CGGGTGTTCA CTCTGGTGAC TCAGCATGTT CTCTTCCTGC ATACACGCTA
AGTCAAGAAA TCCAAGACGT AATGCGCGAG CAAGTTGAAA AGCTAGCGTT TGAGTTGGGT
GTTCGTGGTC TGATGAACAC GCAGTTTGCG GTTAAGAACA ACCAAGTATA CCTAATCGAG
GTGAACCCTC GTGCAGCGCG TACAGTACCG TTCGTATCTA AAGCAACGGG TGCACCAATC
GCTAAGATTG CTGCGCGTGT AATGGCGGGT CAATCGCTTG AAGCTCAAGG CTTTACGAAA
GAAATTATCC CACCTTACTA CTCAGTGAAA GAAGTGGTAC TTCCATTCAA CAAGTTCCCT
GGTGTTGACC CACTGTTAGG CCCAGAAATG CGCTCTACTG GTGAGGTTAT GGGTGTTGGT
GCTACGTTTG CAGAAGCTTA CGCGAAAGCA GAATTGGGTT GTGGCAACAT TTACCCAGAA
GGTGGTCGTG CACTACTGTC TGTTCGTGCA GGTGACAAAG AGCGCGTTGT GGACCTAGCA
TCTAAGTTGA CAAAACTTGG TTACCAGCTA GATGCAACAC ACGGTACAGC AGTGATTCTT
GGTGAAGCGG GTATTAACCC ACGTCTAGTA AACAAAGTAC ACGAAGGTCG TCCTCACATT
CTTGACCGTA TTAAGAACAA CGAGTACACC TACATCGTGA ATACTGCCGC TGGCCGTCAA
GCGATTGAAG ACTCTAAAGT TCTGCGTCGC GGCGCACTAG CTGAGAAAGT GAACTACACG
ACAACACTAA ACGCTGCATT CGCAACTTGT ATGGCACACA CTGCAGACGC GAAGAGCACA
GTAACTTCGG TTCAAGAGCT ACACGCAAAA GTGAAAGCTA GCCTAGAAGC GTAA
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| Protein sequence | MPKRTDIQSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRAILVNSN PATIMTDPDM
ADATYIEPIQ WEVVRNIIAK EKPDAVLPTM GGQTALNCAL DLEKHGVLEE FGVEMIGATA
DAIDKAEDRS RFDKAMKSIG LECPRADTAK TMEEAYAVLD MVGFPCIIRP SFTMGGTGGG
IAYNKEEFEE ICRRGLDLSP TNELLIDESL IGWKEYEMEV VRDKADNCII VCAIENFDPM
GIHTGDSITV APAQTLTDKE YQLMRNASLA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGATPASFEP TIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRN QQESLQKALR GLEVGATGFD EMVDLDAPDA
LTKIRHELKE AGAERIWYIA DAFRAGMSVD GVFNLTQIDR WFLVQIEDIV KLEQELKAKG
FAGLNKEELN KLKRKGFADA RLSKILGVAE SEIRRLRDQY DIHPVYKRVD TCAAEFSSDT
AYMYSSYDDE CEANPTDKDK IMILGGGPNR IGQGIEFDYC CVHASLALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLAIAR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQVA VDRLGLLQPE NATVTTMEQA VEKSREIGYP LVVRPSYVLG
GRAMEIVYDE QDLRRYFNEA VSVSNESPVL LDSFLDDAVE VDIDAICDGE RVVIGGIMEH
IEQAGVHSGD SACSLPAYTL SQEIQDVMRE QVEKLAFELG VRGLMNTQFA VKNNQVYLIE
VNPRAARTVP FVSKATGAPI AKIAARVMAG QSLEAQGFTK EIIPPYYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG ATFAEAYAKA ELGCGNIYPE GGRALLSVRA GDKERVVDLA
SKLTKLGYQL DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNNEYT YIVNTAAGRQ
AIEDSKVLRR GALAEKVNYT TTLNAAFATC MAHTADAKST VTSVQELHAK VKASLEA
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