| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00858 |
|---|
| Symbol | cca |
|---|
| ID | 5553969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 845363 |
|---|
| End bp | 846583 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640906352 |
|---|
| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
|---|
| Protein accession | YP_001444085 |
|---|
| Protein GI | 156973178 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGTTT ATTTAGTTGG TGGTGCAGTT CGAGATCATT TGCTCGGTAT TGATATTTAT
GACAGAGACT GGGTGGTGGT TGGTGCTACT CCAGAAATCA TGCTCAGCCA AGGCTACACG
GCTGTCGGGA AAGACTTTCC TGTGTTTCTT CATCCCAAGA CTAAAGAAGA GCACGCCCTT
GCACGAACCG AAAGAAAATC TGGCGCGGGT TACACTGGCT TTGAATGTTT CTTTGATCAA
AGCGTCACAC TAGAAGAAGA CCTCATCCGT CGCGACCTCA CTATCAACGC CATGGCGATG
GATGAAGATG GCAACTTATA TGACCCTTAT GGCGGCCAAA AAGATATCGA TGCAAAAGTA
CTTCGTCATG TCTCGCAGGC TTTTGTTGAA GACCCTTTGC GTGTTTTACG TGTTGCTCGC
TTCGCGGCTA AGTTAGCGCA CTTGGGTTTT AGTGTCGCAG AGGAAACCAT GCAGCTGATG
CGCGATATGG CCGAATCCGG CGAGCTAAGC ACGCTAACGC CAGAACGCGT TTGGCAAGAA
TGGCATAAGT CGCTTTCTAC CTCTCGCCCA GACGTGTTTT TATCCGTTTT AAGAGATTGC
GGTGCATTAG CCGTTGTCTT GCCAGAAATT GATGCGCTGT TTGGTGTACC TCAGCCAGAG
AAATGGCATC CAGAGATCGA TACGGGTATC CACACCTTAA TGGTCGCGCA GCAAGCTGCG
AAGCTCAGCG ATTCACTGCC AGTACGCTTT GCAGCGCAAG TGCATGATTT GGGTAAAGGT
GTAACGCCAG AAAGCGAATG GCCAAGTCAC AAAATGCATT GCCACACAGG TTTAAAACTT
ATCAAGAAGC TGTGCGATCG CGTACGAGTG CCAAATGAGT TCCGCGACTT AGCATTAATG
GTTTGCGAGC AACACTCTAA CATCCACCGA GCAGCCGAGC TTAAACCACA AACCATCATC
AAAATCCTCA ACAAGTTTGA TGTGTGGCGC AAGGCTGAGC GTCTGCAAGA TATCTTAATT
TGCTGCCAAG CCGATCATGC TGGCCGAAAG GGGCTAGAAG ACCAACCGTA CCCGCAAGCA
GAACTGTTTA TGCGCGCTTA TCAAGCCGCG GCATCGGTTG ATGTGCAAGC CATTATTAAA
GACGGTTTCA AAGGCCCTGC AATCCGTGAT GAACAAGAGA AACGTCGTGC AGAAGCAGTT
AAAGTTGCAT TAGGTAAGTA A
|
|---|
| Protein sequence | MQVYLVGGAV RDHLLGIDIY DRDWVVVGAT PEIMLSQGYT AVGKDFPVFL HPKTKEEHAL
ARTERKSGAG YTGFECFFDQ SVTLEEDLIR RDLTINAMAM DEDGNLYDPY GGQKDIDAKV
LRHVSQAFVE DPLRVLRVAR FAAKLAHLGF SVAEETMQLM RDMAESGELS TLTPERVWQE
WHKSLSTSRP DVFLSVLRDC GALAVVLPEI DALFGVPQPE KWHPEIDTGI HTLMVAQQAA
KLSDSLPVRF AAQVHDLGKG VTPESEWPSH KMHCHTGLKL IKKLCDRVRV PNEFRDLALM
VCEQHSNIHR AAELKPQTII KILNKFDVWR KAERLQDILI CCQADHAGRK GLEDQPYPQA
ELFMRAYQAA ASVDVQAIIK DGFKGPAIRD EQEKRRAEAV KVALGK
|
|---|
| |