Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00817 |
Symbol | |
ID | 5556158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 799781 |
End bp | 801415 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640906311 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001444045 |
Protein GI | 156973138 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATGC GGGTTTTTTT ATATCTAAAT ACCGGAAGTA AACGATTAAA TTGCACGAAA AGTGCAGAAA TCATGAAGGA AGCAAACATG AACGATCAGG TCATTATACT CGACACCACA TTGCGTGATG GCGAACAAGC GTTGTCAGCA AGCTTGACGG TTAAAGAAAA ACTGCAGATT GCCTATGCGC TGGAAAGGCT AGGCGTTGAT GTTATCGAAG CGGGTTTTCC TGTTTCTTCT CCGGGTGATT TCGAGTCCGT ACAAACCATC GCAAAACACA TTAAAAACAG CCGAGTTTGT GCCCTTTCGC GTGCCGTTGC GAAAGACATC GATGCTGCCG CTGAAGCGCT AAAAGTCGCG GACGCATTCC GAATCCACAC TTTCATCTCG ACCTCGACTG TTCATGTTCA AGACAAGCTG CGCCGTAGCT ACGACGATGT TGTAGAAATG GGCGTGAAAG CCGTAAAACA CGCACGTAAC TACACCGATG ACGTTGAGTT TTCTTGTGAA GATGCTGGTC GCACCCCTAT CGACAACCTA TGTCGTATGG TTGAAGCGGC TATCGATGCT GGCGCAAGCA CCATCAATAT CCCAGATACC GTTGGCTACA CAGTACCAAG TGAATTTGGC GGCATCATTG AGACCCTATT CAACCGCGTA CCGAACATCG ACAAAGCGAT CATCTCTGTT CACTGTCACG ATGACTTGGG TATGTCTGTT GCCAACTCTA TCGCAGCCGT GCAAGCGGGT GCTCGTCAGG TAGAAGGGAC TATCAACGGC ATCGGTGAGC GTGCGGGTAA CTGTTCTCTC GAAGAAATCG CGATGATCCT AAAAACGCGC CAAGAGTTCA TGGGTGTGCA TACCGGTCTA AAACACGACG AAATCCACCG TACCAGCAAG TTGGTCAGCC AGCTTTGTAA CATGCCAATC CAGAGCAACA AAGCTATCGT TGGTGCTAAC GCGTTCAGCC ACTCTTCAGG CATTCACCAA GATGGCATGC TAAAGAACAA AAACACTTAC GAGATCATGA CGCCTGAGTC GATTGGTCTT AAGAACCAAG CATTGAACCT AACCAGTCGC AGTGGCCGTG CTGCGGTGAA GAGCCACATG GACGCGATGG GCTACAAGGA AGAAGAGTAC AACCTAGATG CGCTGTACGA AGACTTCTTG AAGCTTGCTG ACCGCAAAGG TCAGGTGTTC GACTACGATC TAGAAGCGCT AATGCACTTC TCTAACTTGC GCGAAGAAGA CGACTTCTAC AAGTTGAACT ACCTAAGCGT GCAATCTGGC AGCGTAATGG CAACCACCAG CGTCAAAATG CAATGTGGCG ATGAAGAAAT GTGTGAAGCT GCCGTCGGTA ATGGTCCAGT TGATGCGCTA TACCAATGTA TCTACCGCGT AACAGGTTAC GAGATCGTCC TAGACAAGTT TGACCTAACA GCAAAAGGTG AAGGTGAAGA CGGCCTGGGC CAAGCAGATA TCATCGCCAA CTACAAAGGT CGTAAGTACC ACGGTACCGG CGTTTCCACC GACATTGTAG AAGCTTCTGG TCAAGCGCTA TTGCACGTCA TCAACAGCAT TCATCGCGCC GATAAGATTG AAGAGATGAA GCAAAAGAGA ATTGCGACGG TTTAA
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Protein sequence | MQMRVFLYLN TGSKRLNCTK SAEIMKEANM NDQVIILDTT LRDGEQALSA SLTVKEKLQI AYALERLGVD VIEAGFPVSS PGDFESVQTI AKHIKNSRVC ALSRAVAKDI DAAAEALKVA DAFRIHTFIS TSTVHVQDKL RRSYDDVVEM GVKAVKHARN YTDDVEFSCE DAGRTPIDNL CRMVEAAIDA GASTINIPDT VGYTVPSEFG GIIETLFNRV PNIDKAIISV HCHDDLGMSV ANSIAAVQAG ARQVEGTING IGERAGNCSL EEIAMILKTR QEFMGVHTGL KHDEIHRTSK LVSQLCNMPI QSNKAIVGAN AFSHSSGIHQ DGMLKNKNTY EIMTPESIGL KNQALNLTSR SGRAAVKSHM DAMGYKEEEY NLDALYEDFL KLADRKGQVF DYDLEALMHF SNLREEDDFY KLNYLSVQSG SVMATTSVKM QCGDEEMCEA AVGNGPVDAL YQCIYRVTGY EIVLDKFDLT AKGEGEDGLG QADIIANYKG RKYHGTGVST DIVEASGQAL LHVINSIHRA DKIEEMKQKR IATV
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