Gene VIBHAR_00790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00790 
Symbol 
ID5555855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp773288 
End bp773992 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content48% 
IMG OID640906284 
Producthypothetical protein 
Protein accessionYP_001444018 
Protein GI156973111 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3840] ABC-type thiamine transport system, ATPase component 
TIGRFAM ID[TIGR01277] thiamine ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTGT TGGATGATGT GCAGTACACC TATCAACGTG AACTGTTTCG TTTTGAGTTA 
GCTATTCAGC GTGGACAAAT CGTTTCACTG ATGGGGCCGA GTGGGGCGGG CAAATCAACC
TTATTGGCGT TAGTTGCTGG TTTTATTAAT CCAGACCATG GCGATATTCT GGTTGATGGT
GAGTCTATCG TGCGTAAAGA GCCGTATCAG CGTCCGTTTT CAATGCTGTT CCAAGAGCAT
AATCTGTTTG CTCACCTGTC AGTAAGGGAC AATATTGGTT TGGGTTTACA TCCGGGTTTA
AAGCTCACTG CAGACCAAAA ACTGCTTGTT GAGCAAGCGG CGAAGCAAGT CGGGGTTGCT
GAGTATCTGG ACCGTTTACC TGAACATCTT TCTGGTGGTC AGCGTCAGCG TGTGGCACTT
GCGCGTTGTT TTGTTCAGCC GCACCCAATG TGGTTACTCG ATGAACCTTT TTCTGCGTTA
GACCCAGTAT TGAGAGAAGA GATGCTGACA CTGGTTAAAC AGTTGGCTGC TGAGCGCGGC
ATTACAGTAT TGATGGTGAC GCACCATTTG AGTGACGCCA GAGCGATTGC TAGTCATTTT
GCTTTTGTGG CTGGTGGTCA GGTTGAAGCT GCAGGAGAGA TTGGTGAGCT TAACGCTCAA
CATAGCAGTA CTGCATTGAA GGTTTTTGTT AAAGCGGCAG GGTGA
 
Protein sequence
MLVLDDVQYT YQRELFRFEL AIQRGQIVSL MGPSGAGKST LLALVAGFIN PDHGDILVDG 
ESIVRKEPYQ RPFSMLFQEH NLFAHLSVRD NIGLGLHPGL KLTADQKLLV EQAAKQVGVA
EYLDRLPEHL SGGQRQRVAL ARCFVQPHPM WLLDEPFSAL DPVLREEMLT LVKQLAAERG
ITVLMVTHHL SDARAIASHF AFVAGGQVEA AGEIGELNAQ HSSTALKVFV KAAG