Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00786 |
Symbol | |
ID | 5555795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 768448 |
End bp | 769806 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906280 |
Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- m eso-diaminopimelate ligase |
Protein accession | YP_001444014 |
Protein GI | 156973107 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATTC ATATCTTGGG TATCTGCGGC ACGTTTATGG GCGGTGCGGC AATTTTAGCG CGTCAGCTAG GTCATAAAGT GACGGGTTCG GATGCCAACG TTTATCCACC AATGAGTACC CTGTTGGAGT CTCAAGGTAT TGAAATTATT GAAGGCTTTG ACCCTTCTCA ACTTGACCCT CAACCCGACC TCGTGGTTAT TGGTAACGCG ATGAGCCGTG GTAACCCATG TGTTGAGCAT GTGCTGAATA CCAATATGCG TTACACCTCT GGTCCACAAT GGTTACAAGA GTTCTTATTG CACGATCGCT GGGTTCTAGC GGTATCGGGT ACCCATGGTA AAACCACCAC TTCAAGTATG TTGGCGTGGA TCTTAGAAGA TTGCGGTTAC CAACCAGGTT TTCTTGTTGG TGGTGTGCTA GGTAACTTCG GTGTGTCAGC TCGCTTGGGT GAAAGTATGT TCTTCGTCGT CGAAGCAGAC GAATACGACA GTGCTTTTTT CGACAAACGA TCTAAGTTTG TTCACTACCA TCCACGTACC TTGATCATGA ACAACCTTGA ATTTGATCAT GCAGACATCT TCGACGATCT TGAAGCGATT AAGCGTCAAT TCCATCATTT AGTACGTACT GTTCCTGGTA ATGGTTTGAT CCTTGCACCG AAGCAAGATC AGTCGCTACA AGACGTGATT GAGCGCGGTT GTTGGACTGA AAAGCAGTTC TCGGGTGTCG ATGGTGATTG GCAAGCACAC AAACTGGTTG TTGATGGCTC AAAATTTGAA GTGTCACTGC AAGGTGAGAA AGTGGGCATT GTTGATTGGG TCCTTGTTGG TGATCACAAC GTAGATAACG CTTTGATGGC TATCGCTGCT GCGCGTCATG TTGGTGTTGC ACCAGAACTG GCTTGTCAGG CTCTTGGGCG TTTTATTAAC ACCAAACGTC GCTTAGAGTT AAAAGGCGAA GAGCAGGGCG TGACGGTTTA TGATGATTTT GCTCATCACC CAACGGCGAT TGAACTGACA TTGGGCGGTT TACGTAACAA GGTTGGTGAA AAACGTATCC TTGCCGTTTT AGAGCCTCGT TCTGCGACCA TGAAACGTGG TGTGAATAAG AATACTTTAG CGGCTTCTCT ACACAGTGCC GATGAAGTGT TCCTCTTCCA ACCAGATAGT ATTGATTGGT CGGTACAAGA GATTGCAGAC CAGTGTAAAC AGCCTGCGTT TGTTGATGCA GAGATGGACT CTTTTGTCGC AAAAATCGTC GAACGAGCGC AACCGGGCGA CCAAATTCTC GTGATGAGTA ATGGTGGTTT TGGCGGTATC CACGGCAAGC TTCTAGAACA ACTGAAACAA AAAGCTTAA
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Protein sequence | MHIHILGICG TFMGGAAILA RQLGHKVTGS DANVYPPMST LLESQGIEII EGFDPSQLDP QPDLVVIGNA MSRGNPCVEH VLNTNMRYTS GPQWLQEFLL HDRWVLAVSG THGKTTTSSM LAWILEDCGY QPGFLVGGVL GNFGVSARLG ESMFFVVEAD EYDSAFFDKR SKFVHYHPRT LIMNNLEFDH ADIFDDLEAI KRQFHHLVRT VPGNGLILAP KQDQSLQDVI ERGCWTEKQF SGVDGDWQAH KLVVDGSKFE VSLQGEKVGI VDWVLVGDHN VDNALMAIAA ARHVGVAPEL ACQALGRFIN TKRRLELKGE EQGVTVYDDF AHHPTAIELT LGGLRNKVGE KRILAVLEPR SATMKRGVNK NTLAASLHSA DEVFLFQPDS IDWSVQEIAD QCKQPAFVDA EMDSFVAKIV ERAQPGDQIL VMSNGGFGGI HGKLLEQLKQ KA
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