Gene VIBHAR_00753 details

Gene Information

• Locus tag: VIBHAR_00753
• Symbol: rpsD
• ID: 5556397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 733620
• End bp: 734240
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906247
• Product: 30S ribosomal protein S4
• Protein accession: YP_001443981
• Protein GI: 156973074
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAT ATTTGGGTCC TAAGCTGAAG CTTAGCCGTC GTGAAGGCAC TGACTTATTC 
CTTAAGTCTG GTGTTCGCGC GATCGATACC AAGTGTAAAA TTGATAACGC ACCAGGTGTA 
CACGGCGCTC GTCGCGGTCG TCTATCTGAG TATGGCGTTC AGCTTCGTGA GAAGCAAAAA 
GTTCGTCGTA TGTACGGCGT TCTAGAAAAA CAATTCCGTA ACTACTACAA AGAAGCTGCA 
CGTCTTAAAG GCAACACAGG TGAGAACCTG CTTCAGCTTC TTGAAGGTCG TCTTGATAAC 
GTAGTTTACC GCATGGGCTT TGGCGCAACT CGCGCAGAAG CACGTCAGCT AGTTAGCCAC 
AAAGCTATCC TAGTTAACGG TAAAGTTGTA AACGTTCCTT CTTTCAAAGT AGCGGCTAAT 
GACGTTGTTT CTATCCGCGA GAAAGCTAAA CAGCAAGCTC GTATCAAAGC AGCTCTAGAA 
GTTGCTGAAC AACGTGAAAA ACCAACTTGG ATTGAAGTAG ATGGTGGCAA GATGGAAGGT 
ACATTCAAGC GTATGCCTGA GCGTTCTGAT CTATCAGCTG ACATCAACGA ACAATTGATC 
GTCGAGCTTT ACTCTAAGTA A 

 

Protein sequence

MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIDNAPGV HGARRGRLSE YGVQLREKQK 
VRRMYGVLEK QFRNYYKEAA RLKGNTGENL LQLLEGRLDN VVYRMGFGAT RAEARQLVSH 
KAILVNGKVV NVPSFKVAAN DVVSIREKAK QQARIKAALE VAEQREKPTW IEVDGGKMEG 
TFKRMPERSD LSADINEQLI VELYSK