Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00730 |
Symbol | rplC |
ID | 5555227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 722330 |
End bp | 722959 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906224 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001443958 |
Protein GI | 156973051 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTC TAATCGGTCG TAAAGTGGGC ATGACCCGCG TATTTACTGA AGACGGCGTT TCTATCCCAG TAACAGTTGT TGAAGTTGAA GCAAACCGTG TTTCTCAAGT TAAAACTCTT GAGACAGATG GCTACGCTGC AATCCAGGTA ACTGCTGGTT CAAAGAAAGC TAACCGTGTA AACAAAGCTG AAGCAGGTCA CTTTGCTAAA GCTGGCGTTG AAGCTGGTCG TGGTCTTTGG GAATTCCGTT TGGAAAACGG TGAAGAGTTC GCAGTTGGCG CTGAGCTAAC AGTTGAACTA TTCAACGAAA CTAAGAAAGT AGACGTTACT GGTACATCTA AGGGTAAAGG TTTCCAAGGC GCTGTTAAGC GTTGGAACTT CCGTACTCAA GATATGACTC ACGGTAACTC ATTGTCTCAC CGTGCACCGG GTTCAATTGG CCAATGTCAA ACTCCAGGTC GCGTATTTAA AGGCAAGAAA ATGGCAGGTC ACATGGGTGC TGAGCGTGTA ACGACTCAAA ACCTAGAGAT CGTACGTGTT GACGCTGAGC GCAATCTGCT TCTTATTAAA GGTGCAGTAC CAGGCTCAAC AGGTGGCAAC GTGATCGTTA AACCAGCTGT TAAAGCATAA
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Protein sequence | MIGLIGRKVG MTRVFTEDGV SIPVTVVEVE ANRVSQVKTL ETDGYAAIQV TAGSKKANRV NKAEAGHFAK AGVEAGRGLW EFRLENGEEF AVGAELTVEL FNETKKVDVT GTSKGKGFQG AVKRWNFRTQ DMTHGNSLSH RAPGSIGQCQ TPGRVFKGKK MAGHMGAERV TTQNLEIVRV DAERNLLLIK GAVPGSTGGN VIVKPAVKA
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